RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ZNF835Q9Y2P0 537 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 FAM215AQ9Y5M1 114 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 LHFPL6Q9Y693 200 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 CRHP06850 196 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 GPR50Q13585 617 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 SSX1Q16384 188 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 FAM27BQ5VT28 67 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 RTL6Q6ICC9 239 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 LINC00346Q8IVM7 164 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 PHC2Q8IXK0 858 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 ZNF679Q8IYX0 411 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 GCNT2Q8N0V5 402 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 OR2AJ1Q8NGZ0 328 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 RAB2BQ8WUD1 216 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 AMELYQ99218 206 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 BCL7BQ9BQE9 202 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 MROQ9BYG7 248 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 C12orf49Q9H741 205 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 ACOXLQ9NUZ1 547 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 MRM2Q9UI43 246 aaKnown RBP20.88■□□□□ 0.93
SIX4-203ENST00000556952 ENPP5Q9UJA9 477 aa20.88■□□□□ 0.93
SIX4-203ENST00000556952 ABHD16AO95870 558 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 IGHV3-9P01782 118 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 TIMP3P35625 211 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 CCDC58Q4VC31 144 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 LIPKQ5VXJ0 399 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 DEGS2Q6QHC5 323 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 ISOC1Q96CN7 298 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 ZNF416Q9BWM5 594 aa20.87■□□□□ 0.93
SIX4-203ENST00000556952 GDF2Q9UK05 429 aaPredicted RBP20.87■□□□□ 0.93
SIX4-203ENST00000556952 MAGEB4O15481 346 aaPredicted RBP20.86■□□□□ 0.93
SIX4-203ENST00000556952 GABARAPO95166 117 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 OR8G3PP0DMU2 310 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 PER3P56645 1201 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 AQP6Q13520 282 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 TIMM50Q3ZCQ8 353 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 FBXW9Q5XUX1 488 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 SEM1Q6ZVN7 128 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 RHOUQ7L0Q8 258 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 ZNF627Q7L945 461 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 KRT77Q7Z794 578 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 UBE2J2Q8N2K1 259 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 YIPF7Q8N8F6 280 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 RNF133Q8WVZ7 376 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 DOK1Q99704 481 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 ASH2LQ9UBL3 628 aa20.86■□□□□ 0.93
SIX4-203ENST00000556952 PSMD9O00233 223 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 SLC19A2O60779 497 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 ZNF254O75437 659 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 CNOT4O95628 575 aaKnown RBP20.85■□□□□ 0.93
SIX4-203ENST00000556952 CST2P09228 141 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 KIR2DL2P43627 348 aaPredicted RBP20.85■□□□□ 0.93
SIX4-203ENST00000556952 TGM4P49221 684 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 SIRPAP78324 504 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 ENDOGQ14249 297 aaKnown RBP20.85■□□□□ 0.93
SIX4-203ENST00000556952 CORO6Q6QEF8 472 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 TFAP2EQ6VUC0 442 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 SLC16A12Q6ZSM3 486 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 WACQ9BTA9 647 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 SLCO1C1Q9NYB5 712 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 PRSS50Q9UI38 385 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 FREM1Q5H8C1 2179 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 CD53P19397 219 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 CELP19835 753 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 GTF2A1P52655 376 aaPredicted RBP20.85■□□□□ 0.93
SIX4-203ENST00000556952 SH3BGRP55822 239 aaPredicted RBP20.85■□□□□ 0.93
SIX4-203ENST00000556952 FAPQ12884 760 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 LIPNQ5VXI9 398 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 LRRN1Q6UXK5 716 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 SLC22A24Q8N4F4 322 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 CNEP1R1Q8N9A8 125 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 PRR7Q8TB68 274 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 HTRA1Q92743 480 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 SLAMF6Q96DU3 332 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 MAP6Q96JE9 813 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 NAA50Q9GZZ1 169 aaKnown RBP20.85■□□□□ 0.93
SIX4-203ENST00000556952 OSGIN2Q9Y236 505 aa20.85■□□□□ 0.93
SIX4-203ENST00000556952 USP9XQ93008 2570 aaPredicted RBP20.84■□□□□ 0.93
SIX4-203ENST00000556952 E9PI62 339 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 PLPP2O43688 288 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 FARS2O95363 451 aaKnown RBP20.84■□□□□ 0.93
SIX4-203ENST00000556952 IL2RAP01589 272 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 B4GALT1P15291 398 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 PSMA1P25786 263 aaKnown RBP20.84■□□□□ 0.93
SIX4-203ENST00000556952 MPGP29372 298 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 GABRA5P31644 462 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 RIDAP52758 137 aaKnown RBP20.84■□□□□ 0.93
SIX4-203ENST00000556952 RPL22L1Q6P5R6 122 aaKnown RBP20.84■□□□□ 0.93
SIX4-203ENST00000556952 CFAP77Q6ZQR2 320 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 DOLPP1Q86YN1 238 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 ZFP41Q8N8Y5 198 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 GJC3Q8NFK1 279 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 ELOVL3Q9HB03 270 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 ST6GALNAC2Q9UJ37 374 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 LRP12Q9Y561 859 aa20.84■□□□□ 0.93
SIX4-203ENST00000556952 ZNF878C9JN71 531 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 OGG1O15527 345 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 TMIGD3P0DMS9 266 aaPredicted RBP20.83■□□□□ 0.92
SIX4-203ENST00000556952 GADD45AP24522 165 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 OPRL1P41146 370 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms