RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ZNF701M0R085 212 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SLC22A1O15245 554 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SPAG7O75391 227 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 EEDO75530 441 aaKnown RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TNFAIP8O95379 198 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 GYPCP04921 128 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 GIG44P09565 113 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 POLR2MP0CAP2 368 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 UBTFL6P0CB48 400 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 DNAH10OSP0CZ25 163 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 CRABP2P29373 138 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 NSG1P42857 185 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SSR4P51571 173 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 MAP3K7CLP57077 242 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 NAA20P61599 178 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 ACVR1Q04771 509 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 LIPEQ05469 1076 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 LRRC63Q05C16 580 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TSC22D1Q15714 1073 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 MRPL23Q16540 153 aaKnown RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 NRF1Q16656 503 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TRMT5Q32P41 509 aaKnown RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF829Q3KNS6 432 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 PPM1LQ5SGD2 360 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 REEP3Q6NUK4 255 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 CNIH2Q6PI25 160 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SCARA5Q6ZMJ2 495 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 RNF165Q6ZSG1 346 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TRMT10CQ7L0Y3 403 aaKnown RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 LHFPL3Q86UP9 236 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SYCE1Q8N0S2 351 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 PUSL1Q8N0Z8 303 aaKnown RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 MS4A15Q8N5U1 240 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TRIML2Q8N7C3 387 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 OR1S2Q8NGQ3 325 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 OR1N2Q8NGR9 330 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SERPINB12Q96P63 405 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SHCBP1LQ9BZQ2 653 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SLC7A5P2Q9GIP4 190 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 RACGAP1Q9H0H5 632 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 C12orf10Q9HB07 376 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 CCNB1IP1Q9NPC3 277 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 TNFRSF19Q9NS68 423 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 PACSIN2Q9UNF0 486 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 SLC25A15Q9Y619 301 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 CDH10Q9Y6N8 788 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 ABCA9Q8IUA7 1624 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 A2MP01023 1474 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 ADGRA3Q8IWK6 1321 aa3.14□□□□□ -1.91
PRPF39-210ENST00000556718 PPRC1Q5VV67 1664 aaKnown RBP3.14□□□□□ -1.91
PRPF39-210ENST00000556718 ARHGEF10O15013 1369 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 RAI1Q7Z5J4 1906 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 NESP48681 1621 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 RNF17Q9BXT8 1623 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 IGLV3-22A0A075B6J6 115 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 FUOMA2VDF0 154 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 EVPLLA8MZ36 301 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 RSPH10B2B2RC85 870 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 FAM25AB3EWG3 89 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 FAM25CB3EWG5 89 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 FAM25GB3EWG6 89 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 PGRMC1O00264 195 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 HAT1O14929 419 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 SULT1B1O43704 296 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 HUS1O60921 280 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 EIF3GO75821 320 aaKnown RBP eCLIP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CRYZL1O95825 349 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 TIMP1P01033 207 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ALDOBP05062 364 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 S100A6P06703 90 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 RSPH10BP0C881 870 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CALM1P0DP23 149 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CALM2P0DP24 149 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CALM3P0DP25 149 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ICAM2P13598 275 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ZBTB25P24278 435 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 STOMP27105 288 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 GPR6P46095 362 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 MRPL19P49406 292 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CDK9P50750 372 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 RAP1GDS1P52306 607 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 GNG2P59768 71 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 PRPS1P60891 318 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ATP6V0D1P61421 351 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CTAG1AP78358 180 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ADARB1P78563 741 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 CAV1Q03135 178 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF763Q0D2J5 394 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 KRR1Q13601 381 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 C16orf72Q14CZ0 275 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 SF3A2Q15428 464 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 MAPRE2Q15555 327 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 HADHQ16836 314 aaKnown RBP3.13□□□□□ -1.91
PRPF39-210ENST00000556718 DNAL1Q4LDG9 190 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 XKR4Q5GH76 650 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 METTL21CQ5VZV1 264 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 DHRS4L2Q6PKH6 230 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 C4orf22Q6V702 233 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 Q6ZR54 194 aa3.13□□□□□ -1.91
PRPF39-210ENST00000556718 ASCL5Q7RTU5 278 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms