RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 C1orf162Q8NEQ5 155 aaPredicted RBP11.08□□□□□ -0.64
APEX1-213ENST00000556296 OR8J1Q8NGP2 316 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 FAM81AQ8TBF8 368 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 TRUB1Q8WWH5 349 aaKnown RBP11.08□□□□□ -0.64
APEX1-213ENST00000556296 CYGBQ8WWM9 190 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 NANOS1Q8WY41 292 aaKnown RBP11.08□□□□□ -0.64
APEX1-213ENST00000556296 NSMAFQ92636 917 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 OTULINQ96BN8 352 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 DDOQ99489 341 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 NUAK2Q9H093 628 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 RPRD1BQ9NQG5 326 aaKnown RBP11.08□□□□□ -0.64
APEX1-213ENST00000556296 AMDHD2Q9Y303 409 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 SLC25A15Q9Y619 301 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 FKBP7Q9Y680 259 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 COL6A5A8TX70 2615 aa11.08□□□□□ -0.64
APEX1-213ENST00000556296 SONP18583 2426 aaKnown RBP11.08□□□□□ -0.64
APEX1-213ENST00000556296 E7EQL1 145 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 H7C417 338 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 PRKYO43930 277 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 MPZL2O60487 215 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 WNT11O96014 354 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 ITGA5P08648 1049 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 CTLA4P16410 223 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 CAPGP40121 348 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 GZMKP49863 264 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 EFNA4P52798 201 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 IL18R1Q13478 541 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 C9orf135Q5VTT2 229 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 PLBD1Q6P4A8 553 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 PHC2Q8IXK0 858 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 OR6V1Q8N148 313 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 TCEANCQ8N8B7 351 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 SETD9Q8NE22 299 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 PROKR2Q8NFJ6 384 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 TMEM163Q8TC26 289 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 MUS81Q96NY9 551 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 FOXB1Q99853 325 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 KCNS3Q9BQ31 491 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 RERGLQ9H628 205 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 SRA1Q9HD15 236 aaKnown RBP11.07□□□□□ -0.64
APEX1-213ENST00000556296 NPAP1Q9NZP6 1156 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 B9D1Q9UPM9 204 aa11.07□□□□□ -0.64
APEX1-213ENST00000556296 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
APEX1-213ENST00000556296 IGKV1D-43A0A0B4J1Z2 117 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 FAM183AA6NL82 134 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 PHF1O43189 567 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 FARS2O95363 451 aaKnown RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 NPR2P20594 1047 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 HNF1AP20823 631 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 APOBEC3AP31941 199 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 THBS2P35442 1172 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 CENPAP49450 140 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 BLVRAP53004 296 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 ADARB1P78563 741 aaKnown RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 MRPS34P82930 218 aaKnown RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 ARF1P84077 181 aaKnown RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 EFNB1P98172 346 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 GLO1Q04760 184 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 NRN1LQ496H8 165 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 ANKRD16Q6P6B7 361 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 ZNF813Q6ZN06 617 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 ZBTB46Q86UZ6 589 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 CPOQ8IVL8 374 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 GLB1L2Q8IW92 636 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 OR9Q1Q8NGQ5 310 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 OR1K1Q8NGR3 316 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 ZNF837Q96EG3 531 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 TSSK2Q96PF2 358 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 IL4I1Q96RQ9 567 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 NMNAT2Q9BZQ4 307 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 SEC61A2Q9H9S3 476 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 HINT3Q9NQE9 182 aaKnown RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 TMEM38BQ9NVV0 291 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 H2AFY2Q9P0M6 372 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 FBXO9Q9UK97 447 aaPredicted RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 MOKQ9UQ07 419 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 UGT2A1Q9Y4X1 527 aa11.06□□□□□ -0.64
APEX1-213ENST00000556296 CHD3Q12873 2000 aaKnown RBP11.06□□□□□ -0.64
APEX1-213ENST00000556296 YLPM1P49750 1951 aaKnown RBP11.05□□□□□ -0.64
APEX1-213ENST00000556296 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 A0A1W2PPL8 197 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 VSTM5A8MXK1 200 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 M0R129 80 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 NDUFS8O00217 210 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 PRODHO43272 600 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 GPRIN2O60269 458 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 B4GALT1P15291 398 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 SPI1P17947 270 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 LAP3P28838 519 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 PDLIM4P50479 330 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 FOXG1P55316 489 aaPredicted RBP11.05□□□□□ -0.64
APEX1-213ENST00000556296 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
APEX1-213ENST00000556296 GABRA6Q16445 453 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 ZNF691Q5VV52 312 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 NXNL2Q5VZ03 156 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 C11orf71Q6IPW1 123 aa11.05□□□□□ -0.64
APEX1-213ENST00000556296 FOXL2NBQ6ZUU3 175 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms