RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 GLTPQ9NZD2 209 aa7.57□□□□□ -1.2
GTF2A1-204ENST00000556268 KLHL21Q9UJP4 597 aa7.57□□□□□ -1.2
GTF2A1-204ENST00000556268 CMYA5Q8N3K9 4069 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 LRRN3E7EW58 273 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MGRN1O60291 552 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 ANP32DO95626 131 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 RAB36O95755 333 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 BCL10O95999 233 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MT-ATP6P00846 226 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 IGHV3-13P01766 116 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 NQO1P15559 274 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 CSNK1A1P48729 337 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 POLR2JP52435 117 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 CDH12P55289 794 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 SELENOVP59797 346 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 UBA52P62987 128 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MOGQ16653 247 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 CD300EQ496F6 205 aaPredicted RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 LRIF1Q5T3J3 769 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 RGS7BPQ6MZT1 257 aaPredicted RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 REEP3Q6NUK4 255 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 ZBTB46Q86UZ6 589 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MSRB3Q8IXL7 192 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 C10orf111Q8N326 155 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 SYT14Q8NB59 555 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC30A7Q8NEW0 376 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MGARPQ8TDB4 240 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 C11orf40Q8WZ69 217 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 RAB39BQ96DA2 213 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 TSPAN32Q96QS1 320 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC6A7Q99884 636 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 MRPL13Q9BYD1 178 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 RAD21L1Q9H4I0 556 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 EVA1AQ9H8M9 152 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 CACYBPQ9HB71 228 aaKnown RBP7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 TMEM38BQ9NVV0 291 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC25A37Q9NYZ2 338 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 WIPI2Q9Y4P8 454 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 ARHGAP32A7KAX9 2087 aa7.56□□□□□ -1.2
GTF2A1-204ENST00000556268 IGHV1-69-2A0A0G2JMI3 117 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 A0A1W2PPW3 197 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 RGS16O15492 202 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 DHHO43323 396 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF500O60304 480 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 FMO6PO60774 539 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 ENTPD5O75356 428 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 MFN2O95140 757 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 LYPD3O95274 346 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 PTHP01270 115 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 MMP7P09237 267 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF133P52736 654 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 BIDP55957 195 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 KLF3P57682 345 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 RPS7P62081 194 aaKnown RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 CDK6Q00534 326 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 PDLIM3Q53GG5 364 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 AVPI1Q5T686 147 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 WDR93Q6P2C0 686 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 TMEM154Q6P9G4 183 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC35D2Q76EJ3 337 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 MAVSQ7Z434 540 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 FUNDC1Q8IVP5 155 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 ADGRG5Q8IZF4 528 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 OR9I1Q8NGQ6 314 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 OR1J2Q8NGS2 313 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 OR5J2Q8NH18 312 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 RAB1CQ92928 201 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC25A44Q96H78 314 aaPredicted RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 SEPHS2Q99611 448 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 SH3GL3Q99963 347 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 SPATA5L1Q9BVQ7 753 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 BCL2L14Q9BZR8 327 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 TMEM38AQ9H6F2 299 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 DDX28Q9NUL7 540 aaKnown RBP7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 PCDHGB1Q9Y5G3 927 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 CACNG2Q9Y698 323 aa7.55□□□□□ -1.2
GTF2A1-204ENST00000556268 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 PRORSD1PA6NEY8 169 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF785A8K8V0 405 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 C5orf58C9J3I9 102 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 UBDO15205 165 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 THY1P04216 161 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 QDPRP09417 244 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 PGA4P0DJD7 388 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 PGA3P0DJD8 388 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ADORA3P0DMS8 318 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 CCL2P13500 99 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 GPX2P18283 190 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 AHCYP23526 432 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 PRTN3P24158 256 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 MMP15P51511 669 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC18A1P54219 525 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ERVS71-1P61550 626 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 RBBP4Q09028 425 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 DYRK1AQ13627 763 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF74Q16587 644 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 HFEQ30201 348 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ALKBH6Q3KRA9 238 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 KRT71Q3SY84 523 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms