RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ICA1LQ8NDH6 482 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 OR52E2Q8NGJ4 325 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 GIPC3Q8TF64 312 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 FAM168AQ92567 244 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 SLCO4A1Q96BD0 722 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 NIPSNAP1Q9BPW8 284 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 WACQ9BTA9 647 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 TPK1Q9H3S4 243 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 ARMC1Q9NVT9 282 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 DUSP13Q9UII6 198 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 POLR1DQ9Y2S0 133 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 GNGT2O14610 69 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 SGCEO43556 437 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 ICMTO60725 284 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 ATP5HO75947 161 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 CLPTM1O96005 669 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 TP53P04637 393 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-219ENST00000555563 ERCC1P07992 297 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-219ENST00000555563 RAD52P43351 418 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 HTR5AP47898 357 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 RASSF2P50749 326 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 CBX1P83916 185 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 KCNMB1Q16558 191 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 SPATA46Q5T0L3 261 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 VASH1Q7L8A9 365 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-219ENST00000555563 ZBTB46Q86UZ6 589 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 LNX2Q8N448 690 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 CYB561A3Q8NBI2 242 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 PAPD5Q8NDF8 572 aaKnown RBP11.77□□□□□ -0.53
SHMT2-219ENST00000555563 NPEPL1Q8NDH3 523 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 SLC26A10Q8NG04 563 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 OR1J1Q8NGS3 322 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 C10orf105Q8TEF2 133 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 FEVQ99581 238 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 TSSK6Q9BXA6 273 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
SHMT2-219ENST00000555563 REV1Q9UBZ9 1251 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 NDRG4Q9ULP0 352 aaKnown RBP11.77□□□□□ -0.53
SHMT2-219ENST00000555563 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
SHMT2-219ENST00000555563 VPS13CQ709C8 3753 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 NAV3Q8IVL0 2385 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 IGLV3-9A0A075B6K5 115 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 RER1O15258 196 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 E2F6O75461 281 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 COX5BP10606 129 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 ZNF250P15622 560 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 PDLIM4P50479 330 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-219ENST00000555563 GLO1Q04760 184 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 CARTPTQ16568 116 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 ALKBH6Q3KRA9 238 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 CD300LDQ6UXZ3 194 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 HS3ST5Q8IZT8 346 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 ABHD4Q8TB40 342 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 SYNPRQ8TBG9 265 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-219ENST00000555563 YY1AP1Q9H869 796 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 MYOZ1Q9NP98 299 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-219ENST00000555563 PLEK2Q9NYT0 353 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 PDP1Q9P0J1 537 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-219ENST00000555563 EIF3KQ9UBQ5 218 aaKnown RBP11.76□□□□□ -0.53
SHMT2-219ENST00000555563 LHFPL6Q9Y693 200 aa11.76□□□□□ -0.53
SHMT2-219ENST00000555563 OR6C6A6NF89 314 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 ABHD16AO95870 558 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 NGFP01138 241 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 TFP02787 698 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 NAT2P11245 290 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 SLC25A16P16260 332 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 PYCR1P32322 319 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 MPV17P39210 176 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 PPP1CBP62140 327 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 CRMP1Q14194 572 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 NKPD1Q17RQ9 610 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 SLC36A3Q495N2 470 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 CCDC92Q53HC0 331 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-219ENST00000555563 TMEM255AQ5JRV8 349 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-219ENST00000555563 CORO6Q6QEF8 472 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 IQCF1Q8N6M8 205 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 SLC37A3Q8NCC5 494 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 OR2T33Q8NG76 320 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 OR9Q1Q8NGQ5 310 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 OR1F12Q8NHA8 337 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 SLC25A40Q8TBP6 338 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 TEX47Q8TBZ9 253 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 SLC7A6Q92536 515 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 MARS2Q96GW9 593 aaKnown RBP11.75□□□□□ -0.53
SHMT2-219ENST00000555563 C4orf45Q96LM5 186 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 DDOQ99489 341 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 TAAR3PQ9P1P4 343 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 DNAJB9Q9UBS3 223 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 BAIAP2Q9UQB8 552 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 DNHD1Q96M86 4753 aa11.75□□□□□ -0.53
SHMT2-219ENST00000555563 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
SHMT2-219ENST00000555563 H3BN98 237 aa11.74□□□□□ -0.53
SHMT2-219ENST00000555563 TIPRLO75663 272 aa11.74□□□□□ -0.53
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