RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FOLR1P15328 257 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 HRH1P35367 487 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 AQP2P41181 271 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 SLC1A1P43005 524 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 CCR6P51684 374 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 PRRX1P54821 245 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 SLC7A9P82251 487 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 PAX5Q02548 391 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 C22orf42Q6IC83 251 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 OAFQ86UD1 273 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ENTHD1Q8IYW4 607 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 IQCKQ8N0W5 287 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR4A4PQ8NGN8 299 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF502Q8TBZ5 544 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR51M1Q9H341 326 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ANKRA2Q9H9E1 313 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF629Q9UEG4 869 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ALKQ9UM73 1620 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ANKARQ7Z5J8 1434 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 CARMIL3Q8ND23 1372 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 TTC21AQ8NDW8 1320 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF816-ZNF321PA0A0X1KG74 233 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 CIB4A0PJX0 185 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 PLAC8L1A1L4L8 177 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 SMCO2A6NFE2 343 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 UTS2O95399 124 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 RAB3DO95716 219 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 AIFM1O95831 613 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 MNAT1P51948 309 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 RPS15P62841 145 aaKnown RBP3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 GGTLC2Q14390 218 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 CCNJQ5T5M9 372 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 TSPO2Q5TGU0 170 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 AGBL2Q5U5Z8 902 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 ANKRD22Q5VYY1 191 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 REEP3Q6NUK4 255 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF493Q6ZR52 646 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 BZW1Q7L1Q6 419 aaKnown RBP3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 LINC01551Q86U37 167 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 PCP2Q8IVA1 136 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR4S2Q8NH73 311 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 MARCH1Q8TCQ1 289 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 TSEN15Q8WW01 171 aaKnown RBP3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 IL22RA2Q969J5 263 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 FAM3DQ96BQ1 224 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 LINC00167Q96N53 147 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 SERPINB12Q96P63 405 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 IFI27L2Q9H2X8 130 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 POLR1AO95602 1720 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 SBNO1A3KN83 1393 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 NEXMIFQ5QGS0 1516 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 DLC1Q96QB1 1528 aa3.49□□□□□ -1.85
CKS1BP1-201ENST00000555221 CLTCL1P53675 1640 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 ASTN1O14525 1302 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 TMX2-CTNND1H3BSU7 103 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 NDUFAB1O14561 156 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 DNALI1O14645 258 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR2F2O95006 317 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 CX3CR1P49238 355 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 CYB561P49447 251 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF136P52737 540 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 UCNP55089 124 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 MERTKQ12866 999 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 PON3Q15166 354 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 MRPL23Q16540 153 aaKnown RBP3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 PPM1LQ5SGD2 360 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 LY6G6FQ5SQ64 297 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 HDDC2Q7Z4H3 204 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 SCD5Q86SK9 330 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 LUZP2Q86TE4 346 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR52K2Q8NGK3 314 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR10G4Q8NGN3 311 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 SLC17A9Q9BYT1 436 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 EXO5Q9H790 373 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 RBAKQ9NYW8 714 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 VANGL2Q9ULK5 521 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 RAB26Q9ULW5 256 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 LAMC1P11047 1609 aa3.48□□□□□ -1.85
CKS1BP1-201ENST00000555221 C1orf167Q5SNV9 1468 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 MAPK8IP3Q9UPT6 1336 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 CHD2O14647 1828 aaKnown RBP3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 DPM1O60762 260 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 SERPINA5P05154 406 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF250P15622 560 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 GALP22466 123 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 SF3A2Q15428 464 aaKnown RBP3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 CHRNA6Q15825 494 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 RSPO1Q2MKA7 263 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 THEM4Q5T1C6 240 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 Q6P435 159 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 TIFABQ6ZNK6 161 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 TEX43Q6ZNM6 134 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF786Q8N393 782 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 STPG2Q8N412 459 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 CEP170P1Q96L14 293 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 PARP12Q9H0J9 701 aaKnown RBP3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 GEMIN7Q9H840 131 aaKnown RBP3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 KCNJ16Q9NPI9 418 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms