RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 BIRC8Q96P09 236 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PADI1Q9ULC6 663 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SELENOFO60613 162 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 TPPP2P59282 170 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 IGHV3-15A0A0B4J1V0 119 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SEMA6DQ8NFY4 1073 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SIGLEC10Q96LC7 697 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ZPBPQ9BS86 351 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ACTR3CQ9C0K3 210 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PLEKHF2Q9H8W4 249 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 UBTD1Q9HAC8 227 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 MED17Q9NVC6 651 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 CEPT1Q9Y6K0 416 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 NUP98P52948 1817 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 FAM221AA4D161 298 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 NME4O00746 187 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TNFSF11O14788 317 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 FUT2Q10981 343 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 STUMQ69YW2 141 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 OR1L4Q8NGR5 311 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 FCRL1Q96LA6 429 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 AKAP11Q9UKA4 1901 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 PLCE1Q9P212 2302 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GIPRP48546 466 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GNG10P50151 68 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 PRDX4Q13162 271 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GAMTQ14353 236 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 HNRNPA1L2Q32P51 320 aaKnown RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GGNBP1Q5YKI7 109 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 HAVCR2Q8TDQ0 301 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 C12orf10Q9HB07 376 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 SLC2A9Q9NRM0 540 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 RAB19A4D1S5 217 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 EIF3FO00303 357 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 EIF1BO60739 113 aaKnown RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 DEFB103AP81534 67 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 NFATC3Q12968 1075 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 LRRC10Q5BKY1 277 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 OR2G6Q5TZ20 316 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 H3F3CQ6NXT2 135 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 LCN15Q6UWW0 184 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 DYNLRB2Q8TF09 96 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CMBLQ96DG6 245 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CTDSP1Q9GZU7 261 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CRLF2Q9HC73 371 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TAS2R4Q9NYW5 299 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 SLCO1B1Q9Y6L6 691 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 PRSS21Q9Y6M0 314 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 POLR2AP24928 1970 aaKnown RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 OR2J2O76002 312 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GCSHP23434 173 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF140P52738 457 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CLEC12BQ2HXU8 276 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TGIF2LXQ8IUE1 241 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 YIPF5Q969M3 257 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 SLC35A4Q96G79 324 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 HSPE1-MOB4S4R3N1 261 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GLAP06280 429 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 NQO2P16083 231 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TMUB2Q71RG4 321 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 SIAH3Q8IW03 269 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 C17orf78Q8N4C9 275 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CD200R1Q8TD46 325 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GORASP2Q9H8Y8 452 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 A0A087WV62 115 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 FABP7O15540 132 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF623O75123 536 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 RAB40ALP0C0E4 278 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 INSM1Q01101 510 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TOR2AQ5JU69 321 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 OR4C5Q8NGB2 326 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 RAB40AQ8WXH6 277 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 NXF2Q9GZY0 626 aaKnown RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CRISPLD2Q9H0B8 497 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 WDR76Q9H967 626 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 KCNG2Q9UJ96 466 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF724A8MTY0 619 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 UMAD1C9J7I0 102 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 SPRY3O43610 288 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ZDHHC11BP0C7U3 371 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 SLC19A1P41440 591 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 KIAA0141Q14154 515 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GABRG1Q8N1C3 465 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 OR4A4PQ8NGN8 299 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 RAB22AQ9UL26 194 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ICMTO60725 284 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GPM6AP51674 278 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TAS1R1Q7RTX1 841 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CDH26Q8IXH8 852 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 GJC3Q8NFK1 279 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM40Q8WWA1 233 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 ESRP2Q9H6T0 727 aaKnown RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 DCCP43146 1447 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 MN1Q10571 1320 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-216ENST00000555002 CCSO14618 274 aa6.32□□□□□ -1.4
SYNE2-216ENST00000555002 HCRTR1O43613 425 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms