RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LANCL1O43813 399 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 GALR3O60755 368 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 PTP4A3O75365 173 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 NDUFB2O95178 105 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 CH25HO95992 272 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 HIST1H2ABP04908 130 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 HOXD4P09016 255 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 FGF2P09038 288 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ACSM4P0C7M7 580 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 CTSEP14091 401 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF19P17023 458 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ATF1P18846 271 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 WT1P19544 449 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SRMP19623 302 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 CXCL3P19876 107 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 DRD5P21918 477 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 PYCR1P32322 319 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 CD79BP40259 229 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 DIO1P49895 249 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF136P52737 540 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SLC25A1P53007 311 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 CTXN1P60606 82 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 PRPS1P60891 318 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SEC61A1P61619 476 aaKnown RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 FLI1Q01543 452 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF85Q03923 595 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SLC3A1Q07837 685 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF345Q14585 488 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 KIR2DS3Q14952 304 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 OR1Q1Q15612 314 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM69Q5SWH9 247 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 CLVS2Q5SYC1 327 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF425Q6IV72 752 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 TFAP2EQ6VUC0 442 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF793Q6ZN11 406 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 DPY19L2P2Q6ZN68 376 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 PGAP1Q75T13 922 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ABHD13Q7L211 337 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 HIST3H2AQ7L7L0 130 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SHFQ7M4L6 423 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 GLCCI1Q86VQ1 547 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 COMTD1Q86VU5 262 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 NR2C2APQ86WQ0 139 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 VRK2Q86Y07 508 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 OR4N4Q8N0Y3 316 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 MMP21Q8N119 569 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM99Q8N816 258 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 LMNTD1Q8N9Z9 388 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 BBS1Q8NFJ9 593 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 OR2L3Q8NG85 312 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 OR11G2Q8NGC1 345 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 OR11H4Q8NGC9 324 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 OR6K3Q8NGY3 331 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 GPR148Q8TDV2 347 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ADAMTS18Q8TE60 1221 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZFPM2Q8WW38 1151 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 HSD17B8Q92506 261 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 HIST1H2ACQ93077 130 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 PTP4A1Q93096 173 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 HAVCR1Q96D42 359 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 C12orf66Q96MD2 445 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZFP3Q96NJ6 502 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 GPX7Q96SL4 187 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SDF2Q99470 211 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 TIMP4Q99727 224 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 VRK1Q99986 396 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 PRSS27Q9BQR3 290 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF426Q9BUY5 554 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 RSPO3Q9BXY4 272 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 GSDMCQ9BYG8 508 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SHARPINQ9H0F6 387 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 METTL17Q9H7H0 456 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SCPEP1Q9HB40 452 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 NOX3Q9HBY0 568 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 MKKSQ9NPJ1 570 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 MEPEQ9NQ76 525 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SDHAF2Q9NX18 166 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 MGAT4CQ9UBM8 478 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 DKK2Q9UBU2 259 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 IL20RAQ9UHF4 553 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ATG4BQ9Y4P1 393 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM14AQ9Y6G1 99 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 A0A0B4J2E0 115 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TRBV2A0A0J9YWF9 115 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 A0A1B0GX12 115 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 OR2M5A3KFT3 312 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SMIM30A4D0T7 59 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM200CA6NKL6 621 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 EFCAB7A8K855 629 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 MPTX1A8MV57 137 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 MCRIP1C9JLW8 97 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 F5H5P2 479 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SMLR1H3BR10 107 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 CDC42EP2O14613 210 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TOR1AO14656 332 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 P2RX6O15547 441 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 B3GALT2O43825 422 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 PRAMEF2O60811 474 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 RBBP9O75884 186 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms