RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ATP6V1B1P15313 513 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SLC2A5P22732 501 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TIMP3P35625 211 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF133P52736 654 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 PER3P56645 1201 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TAS2R43P59537 309 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 PCBD1P61457 104 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 LSM6P62312 80 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ACTA2P62736 377 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ACTG2P63267 376 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 IL13RA1P78552 427 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TGFBR3Q03167 851 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 EMX1Q04741 257 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 BLMHQ13867 455 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 GALEQ14376 348 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 GGTLC2Q14390 218 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TBCEQ15813 527 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 HSPB2Q16082 182 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SGCAQ16586 387 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 HIST3H3Q16695 136 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TEX30Q5JUR7 227 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 C10orf128Q5T292 105 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 C1orf185Q5T7R7 199 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 CARD17Q5XLA6 110 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 NSUN5P2Q63ZY6 315 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 LAIR2Q6ISS4 152 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SLC25A47Q6Q0C1 308 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 KCTD8Q6ZWB6 473 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 RHOUQ7L0Q8 258 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 BCDIN3DQ7Z5W3 292 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 GPR141Q7Z602 305 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 DPPA2Q7Z7J5 298 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ALPK2Q86TB3 2170 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 GLB1L2Q8IW92 636 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TUSC5Q8IXB3 177 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SLC35F2Q8IXU6 374 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SPARTQ8N0X7 666 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 OR6V1Q8N148 313 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 NANOGP1Q8N7R0 232 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SYT14Q8NB59 555 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 NOXO1Q8NFA2 376 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 OR51G2Q8NGK0 314 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 OR52I1Q8NGK6 324 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 OR5M9Q8NGP3 310 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 FNDC9Q8TBE3 224 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SNX33Q8WV41 574 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 PHF3Q92576 2039 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 MED12Q93074 2177 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 MCHR2Q969V1 340 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 APH1AQ96BI3 265 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SNRNP40Q96DI7 357 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZMYND19Q96E35 227 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF845Q96IR2 970 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF385AQ96PM9 386 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 OR2M2Q96R28 347 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 MND1Q9BWT6 205 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 RBM24Q9BX46 236 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ULBP2Q9BZM5 246 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SLCO5A1Q9H2Y9 848 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 NIPAL2Q9H841 368 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 MED20Q9H944 212 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 WDR76Q9H967 626 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 MARCH7Q9H992 704 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 AASSQ9UDR5 926 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 Q9UFV3 132 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 LAMP5Q9UJQ1 280 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 COMMD3-BMI1R4GMX3 469 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 CHD8Q9HCK8 2581 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ARHGAP21Q5T5U3 1957 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ARPC4-TTLL3A0A0A6YYG9 625 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 IGLV1-36A0A0B4J1U3 117 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 A0A1W2PPL8 197 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM129A0AVI4 362 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MBD3L4A6NDZ8 208 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MBD3L3A6NE82 208 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CCDC182A6NF36 153 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MBD3L5A6NJ08 208 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 METTL15A6NJ78 407 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 C12orf71A8MTZ7 269 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF814B7Z6K7 855 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF587BE7ETH6 402 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 H7C1C5 153 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 M0R129 80 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 RAMP1O60894 148 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 NOL3O60936 208 aaKnown RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SS18L1O75177 396 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF254O75437 659 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SULT1C4O75897 302 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF432O94892 652 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 APOC1P02654 83 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MT-ND2P03891 347 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MT-ND5P03915 603 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 AMY2AP04746 511 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 KRT8P05787 483 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 GYPBP06028 91 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CLUP10909 449 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CTLA4P16410 223 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 AMY2BP19961 511 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms