RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 IFI30P13284 250 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 TNFRSF1AP19438 455 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 MSR1P21757 451 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 LAP3P28838 519 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 RPL4P36578 427 aaKnown RBP8.4□□□□□ -1.06
ACTN1-208ENST00000553370 WNT5AP41221 380 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 HTR5AP47898 357 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 RAP1BP61224 184 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 RAP1AP62834 184 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 UBA52P62987 128 aaKnown RBP8.4□□□□□ -1.06
ACTN1-208ENST00000553370 HIST3H3Q16695 136 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 ESCO2Q56NI9 601 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 AWAT1Q58HT5 328 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 MTX3Q5HYI7 312 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 MBNL2Q5VZF2 373 aaKnown RBP8.4□□□□□ -1.06
ACTN1-208ENST00000553370 ZNF774Q6NX45 483 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 ERICH5Q6P6B1 374 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 IGFN1Q86VF2 1251 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 MICU2Q8IYU8 434 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 SIGLECL1Q8N7X8 197 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 OR2Z1Q8NG97 314 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 LZICQ8WZA0 190 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 MARS2Q96GW9 593 aaKnown RBP8.4□□□□□ -1.06
ACTN1-208ENST00000553370 ATP6V1G3Q96LB4 118 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 DUX5Q96PT3 197 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 GPA33Q99795 319 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 PCDHAC1Q9H158 963 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 ZMAT3Q9HA38 289 aaKnown RBP8.4□□□□□ -1.06
ACTN1-208ENST00000553370 C20orf141Q9NUB4 165 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 POLR1DQ9Y2S0 133 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 TIMM10BQ9Y5J6 103 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 NPTNQ9Y639 398 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 AUP1Q9Y679 476 aa8.4□□□□□ -1.06
ACTN1-208ENST00000553370 LOC100509620A0A075B734 347 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 WIPF1O43516 503 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 PIP5K1CO60331 668 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 UBOX5O94941 541 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 CST2P09228 141 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 OR1E2P47887 323 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 MMP15P51511 669 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 ARFIP2P53365 341 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 CTXN1P60606 82 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 RPL27P61353 136 aaKnown RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 PSG4Q00888 419 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 BAMBIQ13145 260 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 PIN1Q13526 163 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 C1orf94Q6P1W5 598 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 SHISA2Q6UWI4 295 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 RRM2BQ7LG56 351 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 TSPYL5Q86VY4 417 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 TSPEARQ8WU66 669 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 CHAC2Q8WUX2 184 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 HDAC2Q92769 488 aaKnown RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 POP5Q969H6 163 aaKnown RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 PPP1R14AQ96A00 147 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 SLC25A28Q96A46 364 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 NABP1Q96AH0 204 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 BPIFA2Q96DR5 249 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 POM121L2Q96KW2 1035 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 C4orf45Q96LM5 186 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 PRSS27Q9BQR3 290 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 SIKE1Q9BRV8 207 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF426Q9BUY5 554 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 MRPL13Q9BYD1 178 aaKnown RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 MS4A7Q9GZW8 240 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 WNT5BQ9H1J7 359 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 RERGLQ9H628 205 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 PURGQ9UJV8 347 aaKnown RBP8.39□□□□□ -1.07
ACTN1-208ENST00000553370 NUP50Q9UKX7 468 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 UGT2A1Q9Y4X1 527 aa8.39□□□□□ -1.07
ACTN1-208ENST00000553370 TRAV27A0A087WT01 109 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 DNAJC9-AS1A6NH13 148 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 NPIPB13A6NJU9 1138 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 EFCAB9A8MZ26 197 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 NPIPB4C9JG80 1138 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 H7C1C5 153 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 MRASO14807 208 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 IGHMP01871 453 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 THRBP10828 461 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 EGR1P18146 543 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 BTG1P62324 171 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 LCN6P62502 163 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 SCRN3Q0VDG4 424 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 ST3GAL3Q11203 375 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 MAPRE2Q15555 327 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 CYBRD1Q53TN4 286 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 RABL3Q5HYI8 236 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 BEND6Q5SZJ8 279 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-208ENST00000553370 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 FOXB2Q5VYV0 432 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 NANOGP8Q6NSW7 305 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 CCDC80Q76M96 950 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 OAFQ86UD1 273 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 MUC20Q8N307 709 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-208ENST00000553370 PCYOX1LQ8NBM8 494 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 OR8J3Q8NGG0 315 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 OR51A7Q8NH64 312 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms