RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 QKIQ96PU8 341 aaKnown RBP eCLIP3.21□□□□□ -1.9
ATXN3-217ENST00000553287 OR5M11Q96RB7 305 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 FAM173AQ9BQD7 235 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 OPN3Q9H1Y3 402 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-217ENST00000553287 GBA3Q9H227 469 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 SPNS1Q9H2V7 528 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 PROK2Q9HC23 129 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ANKHQ9HCJ1 492 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 AIPL1Q9NZN9 384 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 MRTO4Q9UKD2 239 aaKnown RBP3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ABCG2Q9UNQ0 655 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ATG4BQ9Y4P1 393 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.21□□□□□ -1.94e-12■■■□□ 18.3
ATXN3-217ENST00000553287 MED12Q93074 2177 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 MGAM2Q2M2H8 2515 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ABCA1O95477 2261 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 YLPM1P49750 1951 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 NINQ8N4C6 2090 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 RYR3Q15413 4870 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 C13orf42A0A1B0GVH6 325 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 TMEM129A0AVI4 362 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 GFYI3L273 518 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 DUSP14O95147 198 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 TXNDC12O95881 172 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 P04436 131 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 RPN2P04844 631 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 SOD3P08294 240 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CCDC172P0C7W6 258 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CT45A8P0DMV1 189 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CT45A9P0DMV2 189 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 GABRA1P14867 456 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ELK1P19419 428 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 STIP1P31948 543 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 KCNJ2P63252 427 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CRADDP78560 199 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CDKL1Q00532 357 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ASPHQ12797 758 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ASAH1Q13510 395 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CUL1Q13616 776 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 FAM53BQ14153 422 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ITIH4Q14624 930 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 MEP1BQ16820 701 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 EXOC3L2Q2M3D2 409 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 KLHL38Q2WGJ6 581 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 KBTBD12Q3ZCT8 623 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 PAN3Q58A45 887 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CT45A2Q5DJT8 189 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CTSL3PQ5NE16 218 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 PTRHD1Q6GMV3 140 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 TTC23LQ6PF05 361 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CD164L2Q6UWJ8 174 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CES3Q6UWW8 571 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 C12orf54Q6X4T0 127 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 YRDCQ86U90 279 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 LINC00518Q8N0U6 118 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 OR8H3Q8N146 312 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 LIX1Q8N485 282 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 B3GNT7Q8NFL0 401 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 OR10G3Q8NGC4 313 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 OR9A1PQ8NGU1 263 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 NEIL3Q8TAT5 605 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 RAB3IL1Q8TBN0 382 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 RDH11Q8TC12 318 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 MCOLN3Q8TDD5 553 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 SLC13A3Q8WWT9 602 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 P3H4Q92791 437 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 FAM46BQ96A09 425 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 TM4SF19Q96DZ7 209 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 FAM111AQ96PZ2 611 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 SECISBP2Q96T21 854 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 MED18Q9BUE0 208 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 NTMT1Q9BV86 223 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF350Q9GZX5 532 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 AICDAQ9GZX7 198 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 IKZF5Q9H5V7 419 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 DNAJC11Q9NVH1 559 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ZNHIT6Q9NWK9 470 aaKnown RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF629Q9UEG4 869 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 LEF1Q9UJU2 399 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-217ENST00000553287 TFR2Q9UP52 801 aa3.2□□□□□ -1.9
ATXN3-217ENST00000553287 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 hCG_1818297A0A087WSY0 165 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 IGKV3D-11A0A0A0MRZ8 115 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 C17orf51A8MQB3 221 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 SLC33A1O00400 549 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 UBFD1O14562 309 aaKnown RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 OR1F1O43749 312 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 LY6HO94772 140 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 TGM6O95932 706 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 IGHV3-9P01782 118 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 IFNA16P05015 189 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 FCER2P06734 321 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 ERGP11308 486 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 CRYGSP22914 178 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 IGFBP5P24593 272 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 UCP1P25874 307 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 IMPA1P29218 277 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 CYLC1P35663 651 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 RBMXP38159 391 aaKnown RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 STARP49675 285 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms