RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 DOK2O60496 412 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 OR4A8P0C604 315 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 FAM157BP0CG42 384 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 SPI1P17947 270 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 CCNOP22674 350 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 STOMP27105 288 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 EPHA2P29317 976 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 PTH2RP49190 550 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 SLC25A1P53007 311 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 GALK2Q01415 458 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 TEKQ02763 1124 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 SCRN3Q0VDG4 424 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 ADIPOQQ15848 244 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 CORO6Q6QEF8 472 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 ALDH16A1Q8IZ83 802 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 OR10H5Q8NGA6 315 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 OR1J2Q8NGS2 313 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 OTULINQ96BN8 352 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 PERPQ96FX8 193 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 CIB1Q99828 191 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 CXXC4Q9H2H0 198 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 CXorf56Q9H5V9 222 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF442Q9H7R0 627 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 LHFPL6Q9Y693 200 aa12.18□□□□□ -0.46
PTCH1-226ENST00000553011 C5orf49A4QMS7 147 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 RER1O15258 196 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 SURF4O15260 269 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 SGCEO43556 437 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 SNAP29O95721 258 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 HMGN1P05114 100 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 IGFBP5P24593 272 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 SERPINF1P36955 418 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 GDI2P50395 445 aaKnown RBP12.17□□□□□ -0.46
PTCH1-226ENST00000553011 ESRRGP62508 458 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 PPP2R2BQ00005 443 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-226ENST00000553011 VASH1Q7L8A9 365 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-226ENST00000553011 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 PTP4A1Q93096 173 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 WACQ9BTA9 647 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 OSBPL10Q9BXB5 764 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 CACNG6Q9BXT2 260 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 GRIP2Q9C0E4 1043 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 HINT3Q9NQE9 182 aaKnown RBP12.17□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF701Q9NV72 531 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-226ENST00000553011 PLEK2Q9NYT0 353 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 SPEF1Q9Y4P9 236 aa12.17□□□□□ -0.46
PTCH1-226ENST00000553011 M0R129 80 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 TMCC2O75069 709 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 PSKH1P11801 424 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 GLRXP35754 106 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 GGT2P36268 569 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 POLR2IP36954 125 aaKnown RBP12.16□□□□□ -0.46
PTCH1-226ENST00000553011 WNT5AP41221 380 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
PTCH1-226ENST00000553011 HTR5AP47898 357 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 ATP5J2P56134 94 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 ERVS71-1P61550 626 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 PTGES3Q15185 160 aaKnown RBP12.16□□□□□ -0.46
PTCH1-226ENST00000553011 SWI5Q1ZZU3 235 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 HIST2H3PS2Q5TEC6 136 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 LINC01590Q5TEZ4 76 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 SLC18B1Q6NT16 456 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 PLBD1Q6P4A8 553 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 HIST2H3AQ71DI3 136 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 CPOQ8IVL8 374 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 OR6K6Q8NGW6 343 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 SLC7A6Q92536 515 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 PLEKHA8Q96JA3 519 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 GSX2Q9BZM3 304 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 OR51V1Q9H2C8 321 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 WDR76Q9H967 626 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 TVP23BQ9NYZ1 205 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 CMAHPQ9Y471 501 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 COMMD3-BMI1R4GMX3 469 aa12.16□□□□□ -0.46
PTCH1-226ENST00000553011 TMEM129A0AVI4 362 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 OR6C6A6NF89 314 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 ERICH4A6NGS2 130 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 ZAR1LA6NP61 321 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 PRR23D1E9PI22 279 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 EI24O14681 340 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 SYNGR3O43761 229 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 NDUFS7O75251 213 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 LCKP06239 509 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 PRR23D2P0DMB1 279 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 COX5BP10606 129 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 PAX1P15863 534 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF823P16415 610 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 PCSK6P29122 969 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 FMO3P31513 532 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 UCP2P55851 309 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms