RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CD200R1LQ6Q8B3 271 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 Q6ZTK2 550 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 STOX1Q6ZVD7 989 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 MBOAT2Q6ZWT7 520 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 FAM19A1Q7Z5A9 133 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 LYG2Q86SG7 212 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 RIMKLAQ8IXN7 391 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ACOT4Q8N9L9 421 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ZNF383Q8NA42 475 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 KLHDC9Q8NEP7 349 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 KBTBD8Q8NFY9 601 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 OR10Z1Q8NGY1 313 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 OR1L3Q8NH93 324 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SYNPRQ8TBG9 265 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 DOK4Q8TEW6 326 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 DYRK2Q92630 601 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SMIM19Q96E16 107 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ADGRG7Q96K78 797 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 KCTD7Q96MP8 289 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 Q96MT0 163 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 HBEGFQ99075 208 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SORT1Q99523 831 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 GPR22Q99680 433 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 NUDT9Q9BW91 350 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 CDCA4Q9BXL8 241 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 HES7Q9BYE0 225 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 CSTL1Q9H114 145 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 PLEKHA3Q9HB20 300 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ZDHHC4Q9NPG8 344 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 NUDT4Q9NZJ9 180 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ZNF107Q9UII5 783 aaPredicted RBP5.25□□□□□ -1.57
VPS29-210ENST00000552130 MGAT4AQ9UM21 535 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 GINS2Q9Y248 185 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 NTNG1Q9Y2I2 539 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ACOT9Q9Y305 439 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 STK36Q9NRP7 1315 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 ZNF724A8MTY0 619 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 DFFAO00273 331 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 PHF1O43189 567 aaPredicted RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 BCHEP06276 602 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CCDC166P0CW27 439 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CD36P16671 472 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TBPP20226 339 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 LOXP28300 417 aaPredicted RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 CRABP2P29373 138 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TIMP3P35625 211 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 ELK3P41970 407 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TSFMP43897 325 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 GSSP48637 474 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 AMTP48728 403 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CDK9P50750 372 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 AQP5P55064 265 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TMEM33P57088 247 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 AQP6Q13520 282 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 PTGES3Q15185 160 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 GUSBP1Q15486 140 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CCDC153Q494R4 210 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 SPIN4Q56A73 249 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CREB3L2Q70SY1 520 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TMED4Q7Z7H5 227 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 FBXO16Q8IX29 292 aaPredicted RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 SLC22A15Q8IZD6 547 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CA13Q8N1Q1 262 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 RBMXL3Q8N7X1 1067 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 OR2G2Q8NGZ5 317 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TRUB1Q8WWH5 349 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 TESCQ96BS2 214 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CEP170P1Q96L14 293 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 SCGB3A2Q96PL1 93 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 RCHY1Q96PM5 261 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 TBX15Q96SF7 602 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 FAM173AQ9BQD7 235 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 AGMATQ9BSE5 352 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 SLC25A33Q9BSK2 321 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 KRTAP1-5Q9BYS1 174 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 NXF2Q9GZY0 626 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 ZNF385DQ9H6B1 395 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 FBXO8Q9NRD0 319 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 B3GNT2Q9NY97 397 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 ZNF224Q9NZL3 707 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 IL17CQ9P0M4 197 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 SLC17A6Q9P2U8 582 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 ING4Q9UNL4 249 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 PSG11Q9UQ72 335 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 FARSAQ9Y285 508 aaKnown RBP5.24□□□□□ -1.57
VPS29-210ENST00000552130 FRMPD3Q5JV73 1810 aa5.24□□□□□ -1.57
VPS29-210ENST00000552130 ZNF532Q9HCE3 1301 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 DNAJC9-AS1A6NH13 148 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 ZNF233A6NK53 670 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 E9PAM4 449 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 CDIPTO14735 213 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 IGHV2-5P01817 119 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 LINC00271P0C7V0 271 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 S100A1P23297 94 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 PSMA1P25786 263 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms