RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ALKBH6Q3KRA9 238 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 ELFN2Q5R3F8 820 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 GPR139Q6DWJ6 353 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 LINC01356Q8N9X3 169 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 ZNF416Q9BWM5 594 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 SLCO1C1Q9NYB5 712 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 TAAR3PQ9P1P4 343 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 GPR160Q9UJ42 338 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
BRF1-220ENST00000552127 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 NCR1O76036 304 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 HPXP02790 462 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 FABP3P05413 133 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 TACSTD2P09758 323 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 CTLA4P16410 223 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 MNAT1P51948 309 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 ZNF774Q6NX45 483 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 ALDH16A1Q8IZ83 802 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 ZNF101Q8IZC7 436 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 WACQ9BTA9 647 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 EMC7Q9NPA0 242 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 EIF3KQ9UBQ5 218 aaKnown RBP13.15□□□□□ -0.3
BRF1-220ENST00000552127 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
BRF1-220ENST00000552127 C17orf100A8MU93 164 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 SOCS2O14508 198 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 ICMTO60725 284 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 LILRA1O75019 489 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 SCG5P05408 212 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 ACHEP22303 614 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 GLO1Q04760 184 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 SCRN3Q0VDG4 424 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 UGT2A3Q6UWM9 527 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 RFPL4BQ6ZWI9 263 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 FITM2Q8N6M3 262 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 RDH5Q92781 318 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 HPS1Q92902 700 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 SNX18Q96RF0 628 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 GPA33Q99795 319 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 SYT4Q9H2B2 425 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 IL1RAPQ9NPH3 570 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 HINT3Q9NQE9 182 aaKnown RBP13.14□□□□□ -0.31
BRF1-220ENST00000552127 VSX1Q9NZR4 365 aaPredicted RBP13.14□□□□□ -0.31
BRF1-220ENST00000552127 NDRG4Q9ULP0 352 aaKnown RBP13.14□□□□□ -0.31
BRF1-220ENST00000552127 IER3IP1Q9Y5U9 82 aa13.14□□□□□ -0.31
BRF1-220ENST00000552127 DOK2O60496 412 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 SLC16A7O60669 478 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 KHDRBS3O75525 346 aaKnown RBP13.13□□□□□ -0.31
BRF1-220ENST00000552127 PPP1R3DO95685 299 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 TXNDC12O95881 172 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 IGHV3-13P01766 116 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 MT-ND5P03915 603 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 ATP6V1B2P21281 511 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 FPR3P25089 353 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 RRM2P31350 389 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 MAGEB1P43366 347 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 CDH15P55291 814 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 MRPS11P82912 194 aaKnown RBP13.13□□□□□ -0.31
BRF1-220ENST00000552127 TRIP10Q15642 601 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 MOGQ16653 247 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 ZNF718Q3SXZ3 478 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 SPATA46Q5T0L3 261 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 USP43Q70EL4 1123 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 ZER1Q7Z7L7 766 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 ZDHHC21Q8IVQ6 265 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 C1orf174Q8IYL3 243 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 ABHD4Q8TB40 342 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 SLC25A40Q8TBP6 338 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 IPCEF1Q8WWN9 437 aaPredicted RBP13.13□□□□□ -0.31
BRF1-220ENST00000552127 YIPF5Q969M3 257 aa13.13□□□□□ -0.31
BRF1-220ENST00000552127 MARS2Q96GW9 593 aaKnown RBP13.13□□□□□ -0.31
BRF1-220ENST00000552127 B2RBV5 119 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 H3BSA7 217 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 IMPA2O14732 288 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 OR10H3O60404 316 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 ALX3O95076 343 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 FAM107AO95990 144 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 COX5BP10606 129 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 PCMT1P22061 227 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 COL8A2P25067 703 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 GCH1P30793 250 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 SLC6A6P31641 620 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 MPV17P39210 176 aa13.12□□□□□ -0.31
BRF1-220ENST00000552127 GPR6P46095 362 aaPredicted RBP13.12□□□□□ -0.31
BRF1-220ENST00000552127 DVL1P1P54792 670 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms