RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ZNF404Q494X3 552 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GLIPR1L2Q4G1C9 344 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ATP6AP1LQ52LC2 224 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 FBXO48Q5FWF7 155 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM255AQ5JRV8 349 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SPANXN3Q5MJ09 141 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 WDR25Q64LD2 544 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ZFAND6Q6FIF0 208 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 FAM180BQ6P0A1 224 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 WDR93Q6P2C0 686 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NHLRC1Q6VVB1 395 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 C1orf122Q6ZSJ8 110 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TUBA1AQ71U36 451 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 AAED1Q7RTV5 226 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GRINAQ7Z429 371 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 DPPA2Q7Z7J5 298 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PRUNE1Q86TP1 453 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ISCA2Q86U28 154 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 IGFN1Q86VF2 1251 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 COMTD1Q86VU5 262 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 RNF130Q86XS8 419 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 KLBQ86Z14 1044 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SBSPONQ8IVN8 264 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CEP112Q8N8E3 955 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NAT8LQ8N9F0 302 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GATSQ8NAP1 163 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 KIF18AQ8NI77 898 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PSMA8Q8TAA3 256 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 RHEBL1Q8TAI7 183 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SYNPRQ8TBG9 265 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TMED6Q8WW62 240 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM234Q8WY98 164 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CCL17Q92583 94 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PMM1Q92871 262 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 AURKBQ96GD4 344 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SH3YL1Q96HL8 342 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ITCHQ96J02 903 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PLEKHA8Q96JA3 519 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 LRR1Q96L50 414 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SAMD8Q96LT4 415 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 WDFY2Q96P53 400 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 MS4A4EQ96PG1 132 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TSPAN32Q96QS1 320 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 STACQ99469 402 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 DDOQ99489 341 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 P2RX4Q99571 388 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CHP1Q99653 195 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 LYSTQ99698 3801 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NUDT16L1Q9BRJ7 211 aaKnown RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CHID1Q9BWS9 393 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 BCL2L14Q9BZR8 327 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NPFFR1Q9GZQ6 430 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NAT10Q9H0A0 1025 aaKnown RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 C1orf198Q9H425 327 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PIGUQ9H490 435 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 RHOJQ9H4E5 214 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GLIPR2Q9H4G4 154 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF702PQ9H963 129 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NANOGQ9H9S0 305 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 RAB18Q9NP72 206 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 EXOSC3Q9NQT5 275 aaKnown RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TNFRSF19Q9NS68 423 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 C20orf141Q9NUB4 165 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 GIMAP4Q9NUV9 329 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 DCAF16Q9NXF7 216 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 UBAP1Q9NZ09 502 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NUDT4Q9NZJ9 180 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TAAR3PQ9P1P4 343 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 KIF17Q9P2E2 1029 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SLC17A7Q9P2U7 560 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 MIOXQ9UGB7 285 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 IL19Q9UHD0 177 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 NFU1Q9UMS0 254 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 SIGLEC9Q9Y336 463 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CAB39Q9Y376 341 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 UBE2J1Q9Y385 318 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-223ENST00000551623 PSAT1Q9Y617 370 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 KPTNQ9Y664 436 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 TANC2Q9HCD6 1990 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 DNAH3Q8TD57 4116 aa1.81□□□□□ -2.12
PTCH1-223ENST00000551623 CMYA5Q8N3K9 4069 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 A0A1B0GVI7 797 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ISPDA4D126 451 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 GAGE12JA6NER3 117 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NCF1BA6NI72 391 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NCF1CA8MVU1 366 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 A8MZ25 164 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 MCIDASD6RGH6 385 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 FTCDNL1E5RQL4 147 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 OR7A17O14581 309 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CHST1O43916 411 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ENTPD5O75356 428 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 UPK3AO75631 287 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 UBL3O95164 117 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NUDT14O95848 222 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 IGF2P01344 180 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 HLA-HP01893 362 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 S100BP04271 92 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 GPIP06744 558 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PRSS2P07478 247 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms