RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SLC36A2Q495M3 483 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 FAM209AQ5JX71 171 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 ARMC4Q5T2S8 1044 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 RUSC1-AS1Q66K80 236 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 OR2Z1Q8NG97 314 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 OR10AD1Q8NGE0 317 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 OR51A7Q8NH64 312 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 ITLN1Q8WWA0 313 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 RAB1CQ92928 201 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 CMBLQ96DG6 245 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 CCDC140Q96MF4 163 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 SPATA5L1Q9BVQ7 753 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 RBM4Q9BWF3 364 aaKnown RBP5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 SUCNR1Q9BXA5 334 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 MRPL13Q9BYD1 178 aaKnown RBP5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 OR2H1Q9GZK4 316 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 RERGLQ9H628 205 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF385DQ9H6B1 395 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 TMEM38AQ9H6F2 299 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 CCNB1IP1Q9NPC3 277 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 DDX28Q9NUL7 540 aaKnown RBP5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 ERVK13-1Q9NX77 482 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 THUMPD1Q9NXG2 353 aaKnown RBP5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 IL20RAQ9UHF4 553 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 PURGQ9UJV8 347 aaKnown RBP5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 RAB21Q9UL25 225 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 STARD10Q9Y365 291 aa5.75□□□□□ -1.49
PRPF40B-214ENST00000551320 A0A0A6YYJ9 748 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 A0A1W2PRG6 482 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 PRORSD1PA6NEY8 169 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 EVPLLA8MZ36 301 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SLCO1B7G3V0H7 640 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 FBP2O00757 339 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TIMM8AO60220 97 aaPredicted RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 FMO6PO60774 539 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SERPINB7O75635 380 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 FARS2O95363 451 aaKnown RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 MT-ATP6P00846 226 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 IGHV2-70P01814 119 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 HKR1P10072 659 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF26P17031 533 aaPredicted RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 PCMT1P22061 227 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 GCH1P30793 250 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 GDI2P50395 445 aaKnown RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF84P51523 738 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SELENOVP59797 346 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ELF3P78545 371 aaPredicted RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 MRPS11P82912 194 aaKnown RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TNFAIP6P98066 277 aaPredicted RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF154Q13106 437 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 NFYCQ13952 458 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ENDOGQ14249 297 aaKnown RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TAF11Q15544 211 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SLC9A3R2Q15599 337 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 HIST3H3Q16695 136 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 PDLIM3Q53GG5 364 aaPredicted RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TTMPQ5BVD1 217 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ARMCX4Q5H9R4 360 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 C1QTNF12Q5T7M4 302 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF613Q6PF04 617 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SLC25A47Q6Q0C1 308 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TBPL2Q6SJ96 375 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 C5orf46Q6UWT4 87 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 LYPD2Q6UXB3 125 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 PDZD9Q8IXQ8 264 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 KIR3DL3Q8N743 410 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 C11orf65Q8NCR3 313 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 OR13C2Q8NGS9 318 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 OR6S1Q8NH40 331 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SGMS2Q8NHU3 365 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SLC26A7Q8TE54 656 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SLC35B4Q969S0 331 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 NMD3Q96D46 503 aaKnown RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 RAB39BQ96DA2 213 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SGTBQ96EQ0 304 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ELMOD3Q96FG2 381 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 CGREF1Q99674 301 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF747Q9BV97 191 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 MARCH7Q9H992 704 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 INIPQ9NRY2 104 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TMEM106BQ9NUM4 274 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 SLCO1C1Q9NYB5 712 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 PTTG3PQ9NZH4 202 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 PDP1Q9P0J1 537 aaPredicted RBP5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 RIMS3Q9UJD0 308 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ZNF229Q9UJW7 825 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 ADAM18Q9Y3Q7 739 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 NPTNQ9Y639 398 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 AUP1Q9Y679 476 aa5.74□□□□□ -1.49
PRPF40B-214ENST00000551320 TRBV23-1A0A0A0MS06 115 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 PLSCR5A0PG75 271 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 C5orf63A6NC05 138 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 HOXA3O43365 443 aaPredicted RBP5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 SNAP29O95721 258 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 PRB2P02812 416 aaPredicted RBP5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 MT-ND1P03886 318 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 HLA-DPB1P04440 258 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 ANPEPP15144 967 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 PRTN3P24158 256 aa5.73□□□□□ -1.49
PRPF40B-214ENST00000551320 PMELP40967 661 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms