RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 RPL3LQ92901 407 aaKnown RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 C4orf45Q96LM5 186 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 DACH2Q96NX9 599 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 SLX1AQ9BQ83 275 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 SP140LQ9H930 580 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 ELOVL3Q9HB03 270 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 TXNL4BQ9NX01 149 aaKnown RBP12.54□□□□□ -0.4
LETMD1-229ENST00000551261 SLCO1C1Q9NYB5 712 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF281Q9Y2X9 895 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 R4GMQ9 66 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 MED12Q93074 2177 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 CACNA1GO43497 2377 aa12.54□□□□□ -0.4
LETMD1-229ENST00000551261 PTPRQQ9UMZ3 2332 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF879B4DU55 563 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 K7EM74 188 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 GABRPO00591 440 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 GPX5O75715 221 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 SC5DO75845 299 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 MPZL1O95297 269 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 GPANK1O95872 356 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 TGM6O95932 706 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 UBCP0CG48 685 aaKnown RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 CTSSP25774 331 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 HSD11B1P28845 292 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 PSMA6P60900 246 aaKnown RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 RBPJQ06330 500 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 DBPQ10586 325 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 KLRB1Q12918 225 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 SPCS2Q15005 226 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 RAB35Q15286 201 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 SGCAQ16586 387 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 LINC00303Q3SY05 128 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 PHYHD1Q5SRE7 291 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 C1QTNF12Q5T7M4 302 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 TSPO2Q5TGU0 170 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 FBXW9Q5XUX1 488 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 TPRA1Q86W33 373 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 OR2G2Q8NGZ5 317 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 OR5AK2Q8NH90 309 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 FAM57AQ8TBR7 257 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 SMAP2Q8WU79 429 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 GHSRQ92847 366 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 FOXN4Q96NZ1 517 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 TMED9Q9BVK6 235 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 TP63Q9H3D4 680 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-229ENST00000551261 ZNF407Q9C0G0 2248 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 ASPMQ8IZT6 3477 aa12.53□□□□□ -0.4
LETMD1-229ENST00000551261 PRR32B1ATL7 298 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 E9PI62 339 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 RAF1P04049 648 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 MYL9P24844 172 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 MPGP29372 298 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 CDAP32320 146 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 TIMP3P35625 211 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 RPS27P42677 84 aaKnown RBP12.52□□□□□ -0.41
LETMD1-229ENST00000551261 MTNR1BP49286 362 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 TDGF1P3P51864 188 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 FABP5Q01469 135 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 TGFBR3Q03167 851 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 SLC3A1Q07837 685 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 ENDOGQ14249 297 aaKnown RBP12.52□□□□□ -0.41
LETMD1-229ENST00000551261 TAF13Q15543 124 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 SLC36A2Q495M3 483 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 C1orf185Q5T7R7 199 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 OR7E24Q6IFN5 339 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 LINC00346Q8IVM7 164 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 SLC22A24Q8N4F4 322 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 ZFP41Q8N8Y5 198 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 Q8NA96 180 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
LETMD1-229ENST00000551261 AP3S1Q92572 193 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 ITFG2Q969R8 447 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 SPTSSAQ969W0 71 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 MAP6Q96JE9 813 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 AMELYQ99218 206 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 ATF6BQ99941 703 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 CENPOQ9BU64 300 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 HDHD5Q9BXW7 423 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 PRORYQ9H606 182 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 EMC7Q9NPA0 242 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 SLC7A10Q9NS82 523 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 ANKRD11Q6UB99 2663 aaPredicted RBP12.52□□□□□ -0.41
LETMD1-229ENST00000551261 DNAJC13O75165 2243 aa12.52□□□□□ -0.41
LETMD1-229ENST00000551261 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms