RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 KCNMB1Q16558 191 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 MST1LQ2TV78 715 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 Q5PR19 223 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 C11orf71Q6IPW1 123 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 TMEM154Q6P9G4 183 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 VASH1Q7L8A9 365 aaPredicted RBP11.85□□□□□ -0.51
TROAP-213ENST00000550709 SYT9Q86SS6 491 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 C10orf67Q8IYJ2 551 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 DNAJC9Q8WXX5 260 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 SLC7A6Q92536 515 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 TRMT61AQ96FX7 289 aaKnown RBP11.85□□□□□ -0.51
TROAP-213ENST00000550709 SYT3Q9BQG1 590 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 TEX12Q9BXU0 123 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 ZNF442Q9H7R0 627 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 ZNF701Q9NV72 531 aaPredicted RBP11.85□□□□□ -0.51
TROAP-213ENST00000550709 PLEK2Q9NYT0 353 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 TVP23BQ9NYZ1 205 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 GDF2Q9UK05 429 aaPredicted RBP11.85□□□□□ -0.51
TROAP-213ENST00000550709 CMAHPQ9Y471 501 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 LHFPL6Q9Y693 200 aa11.85□□□□□ -0.51
TROAP-213ENST00000550709 ARID1AO14497 2285 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 TMCC2O75069 709 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 HMGN1P05114 100 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 BMP4P12644 408 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 ZNF823P16415 610 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 IGFBP5P24593 272 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 GLRXP35754 106 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 WNT5AP41221 380 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 RPS27P42677 84 aaKnown RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 SLC25A1P53007 311 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 UCP2P55851 309 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 ERVS71-1P61550 626 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 RPS23P62266 143 aaKnown RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 SNRPD2P62316 118 aaKnown RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 ADAM8P78325 824 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 CDK5Q00535 292 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 ZSCAN26Q16670 478 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 SWI5Q1ZZU3 235 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 SPATA46Q5T0L3 261 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 PLBD1Q6P4A8 553 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 LRRC75A-AS1Q8N1F1 130 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 ZNF511Q8NB15 262 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 PLEKHA8Q96JA3 519 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 HCAR1Q9BXC0 346 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 NMNAT2Q9BZQ4 307 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 GRIP2Q9C0E4 1043 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 GABARAPL1Q9H0R8 117 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 OR51V1Q9H2C8 321 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 PLK3Q9H4B4 646 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 MRPL22Q9NWU5 206 aaKnown RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 EIF3KQ9UBQ5 218 aaKnown RBP11.84□□□□□ -0.51
TROAP-213ENST00000550709 DUSP13Q9UII6 198 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 PMF1-BGLAPU3KQ54 211 aa11.84□□□□□ -0.51
TROAP-213ENST00000550709 DSCAMO60469 2012 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 B9A039 149 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 SURF4O15260 269 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 SNAP29O95721 258 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 BAG2O95816 211 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 EPHA2P29317 976 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 FMO3P31513 532 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 GGT2P36268 569 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 RAD52P43351 418 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 ESRRGP62508 458 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
TROAP-213ENST00000550709 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
TROAP-213ENST00000550709 RAB35Q15286 201 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 SNAPC1Q16533 368 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 KLHL12Q53G59 568 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 KDM4DQ6B0I6 523 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 RGS7BPQ6MZT1 257 aaPredicted RBP11.83□□□□□ -0.52
TROAP-213ENST00000550709 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 KRTAP1-3Q8IUG1 177 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 CPOQ8IVL8 374 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 ZNF101Q8IZC7 436 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 PARP8Q8N3A8 854 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 GJC3Q8NFK1 279 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 OR2AJ1Q8NGZ0 328 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 OR1F12Q8NHA8 337 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 ABHD4Q8TB40 342 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 PTP4A1Q93096 173 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 PITX2Q99697 317 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 CIB1Q99828 191 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 VRK1Q99986 396 aaPredicted RBP11.83□□□□□ -0.52
TROAP-213ENST00000550709 WACQ9BTA9 647 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 MRPL37Q9BZE1 423 aaKnown RBP11.83□□□□□ -0.52
TROAP-213ENST00000550709 RIBC2Q9H4K1 309 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 WDR76Q9H967 626 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 SLC25A19Q9HC21 320 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 NDRG4Q9ULP0 352 aaKnown RBP11.83□□□□□ -0.52
TROAP-213ENST00000550709 GRIP1Q9Y3R0 1128 aa11.83□□□□□ -0.52
TROAP-213ENST00000550709 HEATR1Q9H583 2144 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms