RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 LRBAP50851 2863 aa3.35□□□□□ -1.87
LIMA1-205ENST00000550592 NSG1A0A0A6YYJ2 146 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 ARHGEF35A5YM69 484 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 BTBD17A6NE02 478 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 E9PBE3 544 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 TRDMT1O14717 391 aaKnown RBP3.34□□□□□ -1.87
LIMA1-205ENST00000550592 SERPINA3P01011 423 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 P04436 131 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 SLC2A3P11169 496 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 RPS2P15880 293 aaKnown RBP3.34□□□□□ -1.87
LIMA1-205ENST00000550592 PBLDP30039 288 aaPredicted RBP3.34□□□□□ -1.87
LIMA1-205ENST00000550592 GSSP48637 474 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 CAV2P51636 162 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 TAS2R19P59542 299 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 SP4Q02446 784 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 ZNF33AQ06730 810 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 LRRC74AQ0VAA2 488 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 SCRN3Q0VDG4 424 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 NSDHLQ15738 373 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 Q6ZN92 141 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 RFLNAQ6ZTI6 216 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 EGFL6Q8IUX8 553 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 C20orf203Q8NBC4 194 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 OR6C4Q8NGE1 309 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 UCN3Q969E3 161 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.34□□□□□ -1.87
LIMA1-205ENST00000550592 RPUSD4Q96CM3 377 aaKnown RBP3.34□□□□□ -1.87
LIMA1-205ENST00000550592 SLC35E1Q96K37 410 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 ZIM3Q96PE6 472 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 MYCBPQ99417 103 aaPredicted RBP3.34□□□□□ -1.87
LIMA1-205ENST00000550592 FMO2Q99518 471 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 CHRDL1Q9BU40 450 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 ACTR6Q9GZN1 396 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 PPA2Q9H2U2 334 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 GIN1Q9NXP7 522 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 KCNIP3Q9Y2W7 256 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 N6AMT1Q9Y5N5 214 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 ZNF532Q9HCE3 1301 aa3.34□□□□□ -1.87
LIMA1-205ENST00000550592 CCDC168Q8NDH2 2452 aa3.34□□□□□ -1.88
LIMA1-205ENST00000550592 BAZ2AQ9UIF9 1905 aaKnown RBP3.34□□□□□ -1.88
LIMA1-205ENST00000550592 ESPL1Q14674 2120 aa3.34□□□□□ -1.88
LIMA1-205ENST00000550592 VWA8A3KMH1 1905 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PCDH15Q96QU1 1955 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 UTP20O75691 2785 aaKnown RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 A0A1W2PPV9 198 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 XKRY2A2RUG3 117 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 CCDC182A6NF36 153 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 UBXN8O00124 270 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 AGPAT2O15120 278 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 GAPDHP04406 335 aaKnown RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 DUX4L4P0CJ87 422 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 ATP1B2P14415 290 aaPredicted RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 NCF2P19878 526 aaPredicted RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 CMA1P23946 247 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 HTR1EP28566 365 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PRDX3P30048 256 aaKnown RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 ANP32AP39687 249 aaKnown RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 P2RY2P41231 377 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 ATP5IP56385 69 aaPredicted RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 WNT4P56705 351 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 GK3PQ14409 553 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 ATP6AP1Q15904 470 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 BOLA3Q53S33 107 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PRAMEF5Q5TYX0 476 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PRAMEF6Q5VXH4 476 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 SH2D6Q7Z4S9 175 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PIANPQ8IYJ0 282 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 UBE2J2Q8N2K1 259 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PNKDQ8N490 385 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 TPRX1Q8N7U7 411 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 TUBGCP3Q96CW5 907 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 TPD52L3Q96J77 140 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 NRIP2Q9BQI9 281 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 TCHPQ9BT92 498 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 FAIM2Q9BWQ8 316 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PKIBQ9C010 78 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 RNF167Q9H6Y7 350 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 METTL7AQ9H8H3 244 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PLGRKTQ9HBL7 147 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 IL26Q9NPH9 171 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 RRP15Q9Y3B9 282 aaKnown RBP3.33□□□□□ -1.88
LIMA1-205ENST00000550592 PEX16Q9Y5Y5 336 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 COL4A2P08572 1712 aa3.33□□□□□ -1.88
LIMA1-205ENST00000550592 MYLKQ15746 1914 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 OTOGQ6ZRI0 2925 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PPIAL4EA0A075B759 164 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 TRIM64CA6NLI5 447 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 NPIPB7O75200 414 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PPIAL4FP0DN26 164 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 FDFT1P37268 417 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 VHLP40337 213 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 CRYBB2P43320 205 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 VDAC2P45880 294 aaPredicted RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 OR1G1P47890 313 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PRPS1P60891 318 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PSG7Q13046 419 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 MRPL28Q13084 256 aaKnown RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 DAZ2Q13117 558 aaKnown RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 NRF1Q16656 503 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms