RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 KRT80Q6KB66 452 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 IZUMO2Q6UXV1 221 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 HDDC2Q7Z4H3 204 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 DHRSXQ8N5I4 330 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 TFAP2CQ92754 450 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 SLC25A44Q96H78 314 aaPredicted RBP11.59□□□□□ -0.55
NUP188-211ENST00000550219 LRR1Q96L50 414 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 SNX18Q96RF0 628 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 ADI1Q9BV57 179 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 RAB1BQ9H0U4 201 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 PLK3Q9H4B4 646 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 MOV10Q9HCE1 1003 aaKnown RBP11.59□□□□□ -0.55
NUP188-211ENST00000550219 MYOZ1Q9NP98 299 aaPredicted RBP11.59□□□□□ -0.55
NUP188-211ENST00000550219 CMC2Q9NRP2 79 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 GRHPRQ9UBQ7 328 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 ALPK2Q86TB3 2170 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
NUP188-211ENST00000550219 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 TEX13CA0A0J9YWL9 993 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 LOC390937A0A1W2PQ73 354 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ZNF726A6NNF4 738 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 RPL36A-HNRNPH2H7BZ11 118 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 SURF4O15260 269 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ERCC1P07992 297 aaPredicted RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 PGA4P0DJD7 388 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 PGA3P0DJD8 388 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 CD79AP11912 226 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 CBR1P16152 277 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ACADSP16219 412 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 SRD5A1P18405 259 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 NPR2P20594 1047 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 GGT2P36268 569 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 CAPGP40121 348 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 CDKN2AP42771 156 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 HSPA13P48723 471 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 SRSF2Q01130 221 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 HGFACQ04756 655 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 TOP3AQ13472 1001 aaPredicted RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 KRR1Q13601 381 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 MELKQ14680 651 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 HIST3H3Q16695 136 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 TTC23Q5W5X9 447 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 USP51Q70EK9 711 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ADCK1Q86TW2 530 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ZCCHC24Q8N2G6 241 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 NPEPL1Q8NDH3 523 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ZNF555Q8NEP9 628 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 NUP37Q8NFH4 326 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 HDAC2Q92769 488 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 TMEM54Q969K7 222 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 RASD2Q96D21 266 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 NMD3Q96D46 503 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 MSI2Q96DH6 328 aaKnown RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 ALG12Q9BV10 488 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 TPK1Q9H3S4 243 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 ZNF442Q9H7R0 627 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 NOX3Q9HBY0 568 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 VSX1Q9NZR4 365 aaPredicted RBP11.58□□□□□ -0.56
NUP188-211ENST00000550219 KLHL21Q9UJP4 597 aa11.58□□□□□ -0.56
NUP188-211ENST00000550219 PRSS37A4D1T9 235 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 LRP5LA4QPB2 252 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 ZNF99A8MXY4 864 aaPredicted RBP11.57□□□□□ -0.56
NUP188-211ENST00000550219 SLC2A10O95528 541 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 IGHG1P01857 330 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 HLA-HP01893 362 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
NUP188-211ENST00000550219 B4GALT1P15291 398 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 NOS3P29474 1203 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 ARR3P36575 388 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 ZNF133P52736 654 aaPredicted RBP11.57□□□□□ -0.56
NUP188-211ENST00000550219 PIGFQ07326 219 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 CAMK2DQ13557 499 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 SLC35F1Q5T1Q4 408 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 ZNF813Q6ZN06 617 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 PTCHD4Q6ZW05 846 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 FAM169BQ8N8A8 192 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 OR6N1Q8NGY5 312 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 OR4K13Q8NH42 304 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 PRRG3Q9BZD7 231 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 ULBP2Q9BZM5 246 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 B3GAT2Q9NPZ5 323 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 GMPPBQ9Y5P6 360 aa11.57□□□□□ -0.56
NUP188-211ENST00000550219 HEATR1Q9H583 2144 aaKnown RBP11.56□□□□□ -0.56
NUP188-211ENST00000550219 SLC22A23A1A5C7 686 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 RIIAD1A6NNX1 92 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 VSTM5A8MXK1 200 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 XKRYO14609 159 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 PRKYO43930 277 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 TGFAP01135 160 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 IFNGP01579 166 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 DAOP14920 347 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 HNF1AP20823 631 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 CDC42P60953 191 aa11.56□□□□□ -0.56
NUP188-211ENST00000550219 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms