RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 AQP8O94778 261 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ITGB2P05107 769 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 RNH1P13489 461 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 RPA2P15927 270 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 HNRNPA2B1P22626 353 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 CCKBRP32239 447 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 P2RY4P51582 365 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 GMFBP60983 142 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 IGLV3-21P80748 117 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SKP2Q13309 424 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 LY6G6FQ5SQ64 297 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ARHGAP40Q5TG30 622 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 MED25Q71SY5 747 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ZNF615Q8N8J6 731 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 PHOSPHO1Q8TCT1 267 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SLC37A2Q8TED4 501 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 TSEN15Q8WW01 171 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 TAAR8Q969N4 342 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 FBXW5Q969U6 566 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 MRPS24Q96EL2 167 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 FOXN4Q96NZ1 517 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 INTS14Q96SY0 518 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 PARD6GQ9BYG4 376 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 PBX4Q9BYU1 374 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 MRPL37Q9BZE1 423 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ATG5Q9H1Y0 275 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SLC22A13Q9Y226 551 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 YBX2Q9Y2T7 364 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 RFPL4AA6NLU0 287 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 TMEM210A6NLX4 147 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 RFPL4AL1F8VTS6 287 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SIGLEC5O15389 551 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SRPX2O60687 465 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 KLF8O95600 359 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 OPN1LWP04000 364 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 CLPSP04118 112 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 CFPP27918 469 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 CASP6P55212 293 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SIGLEC14Q08ET2 396 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 RASGEF1BQ0VAM2 473 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 FUT7Q11130 342 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 TM4SF20Q53R12 229 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ZNF542PQ5EBM4 170 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ZNF440Q8IYI8 595 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 GABRG1Q8N1C3 465 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 EIF4E3Q8N5X7 224 aaKnown RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-214ENST00000550070 SLC24A4Q8NFF2 622 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 GPX8Q8TED1 209 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 ELOVL3Q9HB03 270 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 GLS2Q9UI32 602 aa9.28□□□□□ -0.92
ERBB3-214ENST00000550070 F5P12259 2224 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 CACNA1IQ9P0X4 2223 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 SLC17A2O00624 439 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 TERTO14746 1132 aaKnown RBP9.27□□□□□ -0.92
ERBB3-214ENST00000550070 CDC40O60508 579 aaKnown RBP eCLIP9.27□□□□□ -0.923e-8■■■■■ 37.8
ERBB3-214ENST00000550070 PNPP00491 289 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 RENP00797 406 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 OR4E1P0C645 316 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 ACHEP22303 614 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 SHHQ15465 462 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 RAB11BQ15907 218 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 EMC4Q5J8M3 183 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 FAM166AQ6J272 317 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 Q6ZSR6 202 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 SLC35D2Q76EJ3 337 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 MCATQ8IVS2 390 aaKnown RBP9.27□□□□□ -0.92
ERBB3-214ENST00000550070 OTOSQ8NHW6 89 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 SHDQ96IW2 340 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 CCNL2Q96S94 520 aaPredicted RBP9.27□□□□□ -0.92
ERBB3-214ENST00000550070 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.92
ERBB3-214ENST00000550070 IGFLR1Q9H665 355 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 BRWD1Q9NSI6 2320 aa9.27□□□□□ -0.92
ERBB3-214ENST00000550070 LOC100289279A0A1B0GTE1 492 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 A8MXE2 369 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 M0QYG6 137 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 GMFGO60234 142 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 RAB3DO95716 219 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 CA3P07451 260 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 GLO1Q04760 184 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 MEP1BQ16820 701 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 C3orf33Q6P1S2 294 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 TMEM205Q6UW68 189 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 TMEM184AQ6ZMB5 413 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 GALNT16Q8N428 558 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 GPBAR1Q8TDU6 330 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 SLC25A28Q96A46 364 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 SEH1LQ96EE3 360 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 SERINC1Q9NRX5 453 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 DMDP11532 3685 aa9.27□□□□□ -0.93
ERBB3-214ENST00000550070 WDR87Q6ZQQ6 2873 aa9.26□□□□□ -0.93
ERBB3-214ENST00000550070 MEX3AA1L020 520 aaKnown RBP9.26□□□□□ -0.93
ERBB3-214ENST00000550070 APOC3P02656 99 aa9.26□□□□□ -0.93
ERBB3-214ENST00000550070 TACR3P29371 465 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms