RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZNF593O00488 134 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-210ENST00000548874 SERPINA5P05154 406 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 CELA3BP08861 270 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 LOXP28300 417 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-210ENST00000548874 RPS27P42677 84 aaKnown RBP18.33■□□□□ 0.52
CACNB3-210ENST00000548874 IDH3GP51553 393 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-210ENST00000548874 RAB39AQ14964 217 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 BEX5Q5H9J7 111 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 CORO6Q6QEF8 472 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 LINC00346Q8IVM7 164 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 OR6N2Q8NGY6 317 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 Q96MT0 163 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 CDADC1Q9BWV3 514 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 ADGRL4Q9HBW9 690 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 GDF2Q9UK05 429 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-210ENST00000548874 RAB26Q9ULW5 256 aa18.33■□□□□ 0.52
CACNB3-210ENST00000548874 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-210ENST00000548874 DPRXA6NFQ7 191 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 M0R1B8 84 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 RER1O15258 196 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 TMCC2O75069 709 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 GOSR1O95249 250 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 SPARCP09486 303 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 CECR9P0C854 216 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 PTAFRP25105 342 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 NAA10P41227 235 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-210ENST00000548874 CCDC92Q53HC0 331 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-210ENST00000548874 NCMAPQ5T1S8 102 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 CFAP77Q6ZQR2 320 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 SHFQ7M4L6 423 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 SLC16A9Q7RTY1 509 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 DPY19L4Q7Z388 723 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 THAP5Q7Z6K1 395 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 CPEB3Q8NE35 698 aaKnown RBP18.32■□□□□ 0.52
CACNB3-210ENST00000548874 GJC3Q8NFK1 279 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 OR2AJ1Q8NGZ0 328 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 AKR7LQ8NHP1 331 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 CNIH3Q8TBE1 160 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 MS4A3Q96HJ5 214 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 MAP6Q96JE9 813 aa18.32■□□□□ 0.52
CACNB3-210ENST00000548874 CNN2Q99439 309 aaKnown RBP18.32■□□□□ 0.52
CACNB3-210ENST00000548874 SNTNA6NMZ2 147 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 SGCEO43556 437 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 SBK2P0C263 348 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 MYF6P23409 242 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 CD40P25942 277 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 PLP2Q04941 152 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 POU4F2Q12837 409 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 RAB35Q15286 201 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 ZNF774Q6NX45 483 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 TMEM108Q6UXF1 575 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 VASH1Q7L8A9 365 aaPredicted RBP18.31■□□□□ 0.52
CACNB3-210ENST00000548874 CDC20BQ86Y33 519 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 OTOSQ8NHW6 89 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 ST7LQ8TDW4 575 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 PLPPR2Q96GM1 343 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 YIPF3Q9GZM5 350 aa18.31■□□□□ 0.52
CACNB3-210ENST00000548874 ESRP2Q9H6T0 727 aaKnown RBP18.31■□□□□ 0.52
CACNB3-210ENST00000548874 PNRC2Q9NPJ4 139 aaKnown RBP18.31■□□□□ 0.52
CACNB3-210ENST00000548874 PTPN13Q12923 2485 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 FAM221AA4D161 298 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 A6NNC1 897 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 SYNGR3O43761 229 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 DOK2O60496 412 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 MRPL3P09001 348 aaKnown RBP18.3■□□□□ 0.52
CACNB3-210ENST00000548874 COX5BP10606 129 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 MTNR1AP48039 350 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 NR1H2P55055 460 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 ZNF91Q05481 1191 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 BSPH1Q075Z2 132 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 CDK5R2Q13319 367 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 SMN1Q16637 294 aaKnown RBP18.3■□□□□ 0.52
CACNB3-210ENST00000548874 LAIR2Q6ISS4 152 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 DCXRQ7Z4W1 244 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 ALDH16A1Q8IZ83 802 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 ZNF454Q8N9F8 522 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 OR10S1Q8NGN2 331 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 C1orf198Q9H425 327 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 PLEK2Q9NYT0 353 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 ATPIF1Q9UII2 106 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 PKDREJQ9NTG1 2253 aa18.3■□□□□ 0.52
CACNB3-210ENST00000548874 IQCMA0A1B0GVH7 501 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 OR6C6A6NF89 314 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 PTHP01270 115 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 DBTP11182 482 aaKnown RBP18.29■□□□□ 0.52
CACNB3-210ENST00000548874 ALOX5APP20292 161 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 APEX1P27695 318 aaKnown RBP18.29■□□□□ 0.52
CACNB3-210ENST00000548874 NUDT6P53370 316 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 NAAAQ02083 359 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 ELFN2Q5R3F8 820 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 IL17RDQ8NFM7 739 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 OR51G2Q8NGK0 314 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 SMAP2Q8WU79 429 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-210ENST00000548874 RNFT2Q96EX2 444 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 POM121L2Q96KW2 1035 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 TMEM204Q9BSN7 226 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 HDHD2Q9H0R4 259 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 MRPS18AQ9NVS2 196 aaKnown RBP18.29■□□□□ 0.52
CACNB3-210ENST00000548874 KLHDC2Q9Y2U9 406 aa18.29■□□□□ 0.52
CACNB3-210ENST00000548874 UTP20O75691 2785 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms