RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 HDDC2Q7Z4H3 204 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 ALDH16A1Q8IZ83 802 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 FITM2Q8N6M3 262 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 OR9I1Q8NGQ6 314 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 VANGL1Q8TAA9 524 aaPredicted RBP11.22□□□□□ -0.61
CCDC59-202ENST00000547758 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 ZNF607Q96SK3 696 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 MCHR1Q99705 422 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 OR2H1Q9GZK4 316 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 TMEM165Q9HC07 324 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 GCM1Q9NP62 436 aa11.22□□□□□ -0.61
CCDC59-202ENST00000547758 IGKV1D-43A0A0B4J1Z2 117 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 H0YL77 283 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 BLOC1S5-TXNDC5H3BN57 136 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 IFNL4K9M1U5 179 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 M0R3H8 397 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 TNFRSF13BO14836 293 aaPredicted RBP11.21□□□□□ -0.61
CCDC59-202ENST00000547758 FMO6PO60774 539 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 F13BP05160 661 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 CSF1P09603 554 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 KITLGP21583 273 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 AQP1P29972 269 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 PITPNBP48739 271 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 DAP3P51398 398 aaKnown RBP11.21□□□□□ -0.61
CCDC59-202ENST00000547758 FAM27BQ5VT28 67 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 NXNQ6DKJ4 435 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 SLC2A7Q6PXP3 512 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 ARL9Q6T311 187 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 NLRC3Q7RTR2 1065 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 REC114Q7Z4M0 266 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 ARMC8Q8IUR7 673 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 C10orf111Q8N326 155 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 NPEPL1Q8NDH3 523 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 ZNF420Q8TAQ5 688 aaPredicted RBP11.21□□□□□ -0.61
CCDC59-202ENST00000547758 TBC1D15Q8TC07 691 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 NSMAFQ92636 917 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 TMEM246Q9BRR3 403 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 ROPN1BQ9BZX4 212 aaPredicted RBP11.21□□□□□ -0.61
CCDC59-202ENST00000547758 POFUT1Q9H488 388 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 ROPN1Q9HAT0 212 aaPredicted RBP11.21□□□□□ -0.61
CCDC59-202ENST00000547758 SMURF2Q9HAU4 748 aa11.21□□□□□ -0.61
CCDC59-202ENST00000547758 SDR39U1Q9NRG7 319 aaPredicted RBP11.21□□□□□ -0.61
CCDC59-202ENST00000547758 TRPC5OSA6NMA1 111 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 CPSF4LA6NMK7 179 aaKnown RBP11.2□□□□□ -0.62
CCDC59-202ENST00000547758 HDAC3O15379 428 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 SERPINB7O75635 380 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 LYPD3O95274 346 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 ABHD16AO95870 558 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 CYB5R3P00387 301 aaPredicted RBP11.2□□□□□ -0.62
CCDC59-202ENST00000547758 THY1P04216 161 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 UGT2B15P54855 530 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 FMODQ06828 376 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 RPL18Q07020 188 aaKnown RBP11.2□□□□□ -0.62
CCDC59-202ENST00000547758 BST1Q10588 318 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 SCARB2Q14108 478 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 ENTPD8Q5MY95 495 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
CCDC59-202ENST00000547758 MAGEB18Q96M61 343 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 PCGF1Q9BSM1 259 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 CDADC1Q9BWV3 514 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC59-202ENST00000547758 SLC25A37Q9NYZ2 338 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 KIF17Q9P2E2 1029 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
CCDC59-202ENST00000547758 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 TIMM10BQ9Y5J6 103 aa11.2□□□□□ -0.62
CCDC59-202ENST00000547758 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 P2RY10O00398 339 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 PHYHO14832 338 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 ENSAO43768 121 aaKnown RBP11.19□□□□□ -0.62
CCDC59-202ENST00000547758 PIP5K1CO60331 668 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 IGHV4-59P01825 116 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 SFTPBP07988 381 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 CST2P09228 141 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 TUBG1P23258 451 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 SLC6A2P23975 617 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 LAP3P28838 519 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 PCBP3P57721 371 aaKnown RBP11.19□□□□□ -0.62
CCDC59-202ENST00000547758 PCBD1P61457 104 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 CD47Q08722 323 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 NPTX1Q15818 432 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 ZNF404Q494X3 552 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 ARMC4Q5T2S8 1044 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 WDR25Q64LD2 544 aaPredicted RBP11.19□□□□□ -0.62
CCDC59-202ENST00000547758 Q6ZSV7 163 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 ZSCAN4Q8NAM6 433 aaPredicted RBP11.19□□□□□ -0.62
CCDC59-202ENST00000547758 SMYD1Q8NB12 490 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 OR6T1Q8NGN1 323 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 ADAMTS16Q8TE57 1224 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 C10orf82Q8WW14 230 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC59-202ENST00000547758 HDAC2Q92769 488 aaKnown RBP11.19□□□□□ -0.62
CCDC59-202ENST00000547758 CMBLQ96DG6 245 aa11.19□□□□□ -0.62
CCDC59-202ENST00000547758 ZNF426Q9BUY5 554 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms