RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LMO7Q8WWI1 1683 aa3.33□□□□□ -1.88
SCAF11-210ENST00000547654 N4BP2Q86UW6 1770 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-210ENST00000547654 TP53BP1Q12888 1972 aaPredicted RBP3.32□□□□□ -1.88
SCAF11-210ENST00000547654 CEP290O15078 2479 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 MEX3AA1L020 520 aaKnown RBP3.32□□□□□ -1.88
SCAF11-210ENST00000547654 TSPAN11A1L157 253 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 A8MX80 341 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 FAM220BPB1ANY3 271 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 SCAMP2O15127 329 aaKnown RBP3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF254O75437 659 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ZFAND5O76080 213 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 LSM8O95777 96 aaKnown RBP3.32□□□□□ -1.88
SCAF11-210ENST00000547654 CD160O95971 181 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 HBE1P02100 147 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 KLK1P06870 262 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 UGT1A3P35503 534 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 CSKP41240 450 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 RGRP47804 291 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 KCNJ3P48549 501 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ATP5J2P56134 94 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ERVPABLB-1P60509 514 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 RPEL1Q2QD12 228 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 QRICH1Q2TAL8 776 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 NHLRC3Q5JS37 347 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 OLFML2AQ68BL7 652 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 PRMT9Q6P2P2 845 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 TFAP2EQ6VUC0 442 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 MBOAT1Q6ZNC8 495 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 LHFPL3Q86UP9 236 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 LRRC8AQ8IWT6 810 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 RDH10Q8IZV5 341 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 SNX31Q8N9S9 440 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 OR10H4Q8NGA5 316 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ACER1Q8TDN7 264 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 NEIL2Q969S2 332 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 MRGPRFQ96AM1 343 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ITCHQ96J02 903 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 TSSK3Q96PN8 268 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF317Q96PQ6 595 aaPredicted RBP3.32□□□□□ -1.88
SCAF11-210ENST00000547654 PSMB7Q99436 277 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 RARRES2Q99969 163 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 LZTS2Q9BRK4 669 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 BBS2Q9BXC9 721 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 FGFBP2Q9BYJ0 223 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 SELENOIQ9C0D9 397 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 CWH43Q9H720 699 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 KIR3DX1Q9H7L2 352 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 LY9Q9HBG7 655 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 EML4Q9HC35 981 aaKnown RBP3.32□□□□□ -1.88
SCAF11-210ENST00000547654 ANKHQ9HCJ1 492 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 NRBP2Q9NSY0 501 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 EXD2Q9NVH0 621 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 GGA2Q9UJY4 613 aa3.32□□□□□ -1.88
SCAF11-210ENST00000547654 CCDC88AQ3V6T2 1871 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RBBP6Q7Z6E9 1792 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 ITSN1Q15811 1721 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CCDC18Q5T9S5 1454 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 OVOS2A0A0G2JMS6 1433 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 OVOS2A0A0J9YW53 1432 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 OVOS2Q6IE36 1432 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 ADGRA3Q8IWK6 1321 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 IGLV3-22A0A075B6J6 115 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 A0A1B0GW55 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RBMY1BA6NDE4 496 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RBMY1EA6NEQ0 496 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 SLC22A20A6NK97 555 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 TRPC5OSA6NMA1 111 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CALUO43852 315 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 TBL1XO60907 577 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 FKBP6O75344 327 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 MPDU1O75352 247 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 ENTPD5O75356 428 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CLDN11O75508 207 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 MELTFP08582 738 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RBMY1DP0C7P1 496 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L2P0CJ85 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L3P0CJ86 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L4P0CJ87 422 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L5P0CJ88 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L6P0CJ89 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L7P0CJ90 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RBMY1A1P0DJD3 496 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 HPGDP15428 266 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 NQO2P16083 231 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CTRB1P17538 263 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 IL12BP29460 328 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 OR1E1P30953 314 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RFC3P40938 356 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 UCNP55089 124 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 ATP6V0D1P61421 351 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 SELENOTP62341 195 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 SP4Q02446 784 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CD47Q08722 323 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 ART3Q13508 389 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 TGIF1Q15583 401 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 PSG3Q16557 428 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 AANATQ16613 207 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms