RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FAM157AC9JC47 383 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 H7C1C5 153 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 SPRY3O43610 288 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 TIMM8AO60220 97 aaPredicted RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 SLC16A7O60669 478 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 IGHV1-46P01743 117 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 FUT4P22083 530 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 TNFSF4P23510 183 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 SDHAP31040 664 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 MPV17P39210 176 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 HTR5AP47898 357 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 MMP15P51511 669 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 RPS6KA3P51812 740 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 LSM6P62312 80 aaKnown RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 LCN6P62502 163 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 AQP6Q13520 282 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 KRR1Q13601 381 aaKnown RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 KRTAP24-1Q3LI83 254 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 MTX3Q5HYI7 312 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 PGM2L1Q6PCE3 622 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 DNM1P34Q6PK57 102 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 DPY19L2P2Q6ZN68 376 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 RINLQ6ZS11 566 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 RFPL4BQ6ZWI9 263 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 FAM122BQ7Z309 247 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 TSEN54Q7Z6J9 526 aaKnown RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 CPLX4Q7Z7G2 160 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 IPCEF1Q8WWN9 437 aaPredicted RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 CCL17Q92583 94 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 FAM46AQ96IP4 442 aaKnown RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 RSRC1Q96IZ7 334 aaKnown RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 GPX7Q96SL4 187 aaPredicted RBP7.97□□□□□ -1.13
YBX3-218ENST00000546298 C19orf24Q9BVV8 132 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 FAM107BQ9H098 131 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 GORASP2Q9H8Y8 452 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 LPAR2Q9HBW0 351 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 EMC7Q9NPA0 242 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 NRIP3Q9NQ35 241 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 PLEK2Q9NYT0 353 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 EGFL7Q9UHF1 273 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 MAGEL2Q9UJ55 1249 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 SIGLEC7Q9Y286 467 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 WIPI2Q9Y4P8 454 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 J3QW42 95 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 WNT9BO14905 357 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 SURF4O15260 269 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 SNX3O60493 162 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 DOK2O60496 412 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 TXNDC12O95881 172 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 NGFP01138 241 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 CD55P08174 381 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 CTLA4P16410 223 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 CRABP1P29762 137 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 IFNGR2P38484 337 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 OMPP47874 163 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 LIMS1P48059 325 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 RGS6P49758 472 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 TNFAIP6P98066 277 aaPredicted RBP7.96□□□□□ -1.14
YBX3-218ENST00000546298 MESTQ5EB52 335 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 SAMD4BQ5PRF9 694 aaKnown RBP7.96□□□□□ -1.14
YBX3-218ENST00000546298 AVPI1Q5T686 147 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 FAHD2BQ6P2I3 314 aaPredicted RBP7.96□□□□□ -1.14
YBX3-218ENST00000546298 GLB1L2Q8IW92 636 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 OR5L1Q8NGL2 311 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 OR52J3Q8NH60 311 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 PTP4A1Q93096 173 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 FAHD2AQ96GK7 314 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 PYURFQ96I23 114 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 C7orf34Q96L11 122 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 NSMCE2Q96MF7 247 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 LRRC37BQ96QE4 947 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 DCLRE1CQ96SD1 692 aaKnown RBP7.96□□□□□ -1.14
YBX3-218ENST00000546298 SYT4Q9H2B2 425 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 OCEL1Q9H607 264 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 RERGLQ9H628 205 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 METTL17Q9H7H0 456 aaPredicted RBP7.96□□□□□ -1.14
YBX3-218ENST00000546298 NDE1Q9NXR1 346 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 VSX1Q9NZR4 365 aaPredicted RBP7.96□□□□□ -1.14
YBX3-218ENST00000546298 ATPIF1Q9UII2 106 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 KLHL21Q9UJP4 597 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 POLR1DQ9Y2S0 133 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 IER3IP1Q9Y5U9 82 aa7.96□□□□□ -1.14
YBX3-218ENST00000546298 A0A0G2JMP0 313 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 TRBV4-1A0A0J9YWV2 114 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 A0A0X1KG70 313 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 OR6C6A6NF89 314 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 ZSCAN5BA6NJL1 495 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 J3QLI3 93 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 IMPA2O14732 288 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 GADD45GO95257 159 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 MPZL1O95297 269 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 PNPP00491 289 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 SCG5P05408 212 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 HSD17B1P14061 328 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 ZNF26P17031 533 aaPredicted RBP7.95□□□□□ -1.14
YBX3-218ENST00000546298 TNFRSF1AP19438 455 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 GATA3P23771 443 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 SLC6A6P31641 620 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 CENPAP49450 140 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms