RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 HIST2H3AQ71DI3 136 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PIGTQ969N2 578 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PAPOLGQ9BWT3 736 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 BARHL1Q9BZE3 327 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 CD207Q9UJ71 328 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 KCNG2Q9UJ96 466 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 VSTM5A8MXK1 200 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PPP1R2P9O14990 202 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 AQP8O94778 261 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 MVDP53602 400 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 RBM39Q14498 530 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 MAMSTRQ6ZN01 415 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 DOK3Q7L591 496 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR13H1Q8NG92 308 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR1J2Q8NGS2 313 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PSMF1Q92530 271 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PELI1Q96FA3 418 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 C20orf24Q9BUV8 137 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 LAT2Q9GZY6 243 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 TTLL8A6PVC2 850 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 NPIPB8E9PQR5 432 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 SERPINA7P05543 415 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR13C7P0DN81 318 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 CD1CP29017 333 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 ERVK-16P61578 105 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 RPS15P62841 145 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 EEF1A2Q05639 463 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 MSMO1Q15800 293 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 TMEM88Q6PEY1 159 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 GRAMD2AQ8IUY3 354 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 MRPL41Q8IXM3 137 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 GALNT16Q8N428 558 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 LMAN1LQ9HAT1 526 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PTRH2Q9Y3E5 179 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR6C6A6NF89 314 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 GLSO94925 669 aaPredicted RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 FOLR1P15328 257 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 TAS2R30P59541 319 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 ELAVL1Q15717 326 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 RBMS3Q6XE24 437 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 SPICQ8N5J4 248 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 TMEM229BQ8NBD8 167 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR9K2Q8NGE7 335 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR13C8Q8NGS7 320 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 OR6K3Q8NGY3 331 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 SIGLEC11Q96RL6 698 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PARP12Q9H0J9 701 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 C19orf12Q9NSK7 152 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 SLCO1C1Q9NYB5 712 aa11.12□□□□□ -0.63
NPC1L1-204ENST00000546276 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC17A2O00624 439 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 CD160O95971 181 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 GUCA2AQ02747 115 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HLXQ14774 488 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 PHLDA2Q53GA4 152 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 KIAA0907Q7Z7F0 614 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 C16orf52Q8NHV5 167 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SLAMF6Q96DU3 332 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 TEX101Q9BY14 249 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HS3ST3A1Q9Y663 406 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 A0A1W2PPV4 95 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 POM121BA6NF01 834 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 MCRIP1C9JLW8 97 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 FFAR1O14842 300 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 PLA2G10O15496 165 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 ST8SIA3O43173 380 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 POU3F2P20265 443 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HRH1P35367 487 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 FOLR3P41439 243 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 PPICP45877 212 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 STK11Q15831 433 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 ZNF79Q15937 498 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 BATFQ16520 125 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 OR51A4Q8NGJ6 313 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 NT5CQ8TCD5 201 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 C12orf57Q99622 126 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 ABHD6Q9BV23 337 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 NXF2Q9GZY0 626 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 RNF32Q9H0A6 362 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 C20orf141Q9NUB4 165 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 R4GMQ9 66 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 URB1O60287 2271 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 RPS2P15880 293 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 DPP4P27487 766 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 PXNP49023 591 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HSF1Q00613 529 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SSX2Q16385 188 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms