RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TNFP01375 233 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 HLA-DRAP01903 254 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 CAPN1P07384 714 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 RNH1P13489 461 aaKnown RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 HNRNPH3P31942 346 aaKnown RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 TDGF1P3P51864 188 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 ENPEPQ07075 957 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 LAGE3Q14657 143 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 IRF4Q15306 451 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 CHRNA6Q15825 494 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 FAM83EQ2M2I3 478 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 DEFB116Q30KQ4 102 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 SYPL2Q5VXT5 272 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 PMF1Q6P1K2 205 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 C22orf39Q6P5X5 142 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 FAM199XQ6PEV8 388 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 C6orf89Q6UWU4 347 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 TAF8Q7Z7C8 310 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 BIVMQ86UB2 503 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 IQCKQ8N0W5 287 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 NKAPP1Q8N9T2 125 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 OR10G2Q8NGC3 310 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 CT55Q8WUE5 264 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 PATE1Q8WXA2 126 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 KRT35Q92764 455 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 ISG20Q96AZ6 181 aaKnown RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 BTN2A3PQ96KV6 586 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 PGLYRP4Q96LB8 373 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 HSFY1Q96LI6 401 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 TSNARE1Q96NA8 513 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 SERPINB11Q96P15 392 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 KCNA7Q96RP8 456 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 RUFY1Q96T51 708 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 KLHDC3Q9BQ90 382 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 PLGRKTQ9HBL7 147 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 CGNQ9P2M7 1197 aaKnown RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 SVEP1Q4LDE5 3571 aa2.34□□□□□ -2.04
SNHG1-224ENST00000545688 TET2Q6N021 2002 aaPredicted RBP2.34□□□□□ -2.04
SNHG1-224ENST00000545688 PKD1L1Q8TDX9 2849 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 NYNRINQ9P2P1 1898 aaKnown RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CACNA1CQ13936 2221 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 PPIAL4EA0A075B759 164 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 PPIAL4CA0A0B4J2A2 164 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 PPIAL4DF5H284 164 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 POLR1CO15160 346 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 MAPK13O15264 365 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 TOX3O15405 576 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 TM7SF2O76062 418 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 LALBAP00709 142 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 GIPP09681 153 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 PPIAL4FP0DN26 164 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CTSEP14091 401 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CCNB1P14635 433 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 COX6B1P14854 86 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CA5AP35218 305 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CCNHP51946 323 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CRISP3P54108 245 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CDH4P55283 916 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 HMGN5P82970 282 aaKnown RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CHRNB3Q05901 458 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 ADIGQ0VDE8 80 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 BST2Q10589 180 aaKnown RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 PSG5Q15238 335 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CHI3L2Q15782 390 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CARD16Q5EG05 197 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 PIGGQ5H8A4 983 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 XKRXQ6PP77 449 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 UNC5DQ6UXZ4 953 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 WDR88Q6ZMY6 472 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF836Q6ZNA1 936 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 SETD3Q86TU7 594 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 TAC4Q86UU9 113 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 GCNT2Q8N0V5 402 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF709Q8N972 641 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 OR8H1Q8NGG4 311 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 OR56A4Q8NGH8 313 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 RNF139Q8WU17 664 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 NCLNQ969V3 563 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 ZSCAN16Q9H4T2 348 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 LPAR2Q9HBW0 351 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 LHX9Q9NQ69 397 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 DYRK4Q9NR20 520 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 CISHQ9NSE2 258 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 TREM2Q9NZC2 230 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 SLC17A4Q9Y2C5 497 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 COQ4Q9Y3A0 265 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 STRAPQ9Y3F4 350 aaKnown RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 MFHAS1Q9Y4C4 1052 aa2.33□□□□□ -2.04
SNHG1-224ENST00000545688 SONP18583 2426 aaKnown RBP2.33□□□□□ -2.04
SNHG1-224ENST00000545688 ARGFXA6NJG6 315 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 F5H5T6 163 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 LGALS8O00214 317 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 ZW10O43264 779 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 HCRTR1O43613 425 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 SPAG7O75391 227 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 SPAG6O75602 509 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 MT-ND3P03897 115 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 ALPPP05187 535 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 MRPL3P09001 348 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms