RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SLC35A1P78382 337 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 IL13RA1P78552 427 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 GLYATL3Q5SZD4 288 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RTL6Q6ICC9 239 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 LSMEM1Q8N8F7 131 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ST7LQ8TDW4 575 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 RNF128Q8TEB7 428 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CCDC74AQ96AQ1 378 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 ORAI1Q96D31 301 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PELI1Q96FA3 418 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 PRSS27Q9BQR3 290 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 FGF21Q9NSA1 209 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 KCNG2Q9UJ96 466 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 FLVCR2Q9UPI3 526 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 R4GMQ9 66 aa5.25□□□□□ -1.57
VPS50-220ENST00000544910 CENPVL1A0A0U1RR11 272 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR6C68A6NDL8 312 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR2W5A6NFC9 320 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 H7C1Q1 480 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CTDSPLO15194 276 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OGG1O15527 345 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PRICKLE3O43900 615 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 SCGB1D1O95968 90 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OPN1LWP04000 364 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TPOP07202 933 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 MSX1P28360 303 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF136P52737 540 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 UBE2KP61086 200 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PPA1Q15181 289 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 GPR157Q5UAW9 335 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TMUB2Q71RG4 321 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ABI3BPQ7Z7G0 1075 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR14L1PQ8NHC6 308 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 DERL3Q96Q80 235 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 MARVELD1Q9BSK0 173 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 NXF5Q9H1B4 397 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR10A2Q9H208 303 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 C12orf10Q9HB07 376 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CHRNA9Q9UGM1 479 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PILRAQ9UKJ1 303 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PTRH2Q9Y3E5 179 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 COL4A4P53420 1690 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 M0QYG6 137 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SRFP11831 508 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 NME1P15531 152 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 RPS4Y1P22090 263 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 HOXD11P31277 338 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 PER3P56645 1201 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 HSF1Q00613 529 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PSG6Q00889 435 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SMAD4Q13485 552 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 CAMK2DQ13557 499 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 GGTLC2Q14390 218 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CNN3Q15417 329 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 VWA2Q5GFL6 755 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TOR2AQ5JU69 321 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TMEM91Q6ZNR0 172 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 Q6ZS52 159 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 NLRC3Q7RTR2 1065 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF679Q8IYX0 411 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 DND1Q8IYX4 353 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 FNDC9Q8TBE3 224 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CHAC2Q8WUX2 184 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 APOBEC4Q8WW27 367 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 SCARF2Q96GP6 870 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 VSTM2LQ96N03 204 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ST6GALNAC5Q9BVH7 336 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 NUDT9Q9BW91 350 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 RBM24Q9BX46 236 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 SLC25A31Q9H0C2 315 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SCPEP1Q9HB40 452 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ENY2Q9NPA8 101 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF223Q9UK11 482 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 WIF1Q9Y5W5 379 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 LOC107986453A0A1B0GWG9 222 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SLC22A23A1A5C7 686 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 C2orf72A6NCS6 295 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ANKUB1A6NFN9 424 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF850A8MQ14 1090 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 RGS13O14921 159 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 AGPAT2O15120 278 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 LIPCP11150 499 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 RAB4AP20338 218 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZP3P21754 424 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CLDN17P56750 224 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PDZK1IP1Q13113 114 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 AANATQ16613 207 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ELFN2Q5R3F8 820 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FIP1L1Q6UN15 594 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 KMT5CQ86Y97 462 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZBTB44Q8NCP5 570 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TMEM52Q8NDY8 209 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR51S1Q8NGJ8 323 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR10Z1Q8NGY1 313 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR4K15Q8NH41 348 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 NPRL2Q8WTW4 380 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ST8SIA1Q92185 356 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 HAS2Q92819 552 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FGGYQ96C11 551 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 B9D1Q9UPM9 204 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms