RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 KNG1P01042 644 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 IGHG1P01857 330 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ASAH2BP0C7U1 165 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ZNF32P17041 273 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 KDELR2P33947 212 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 GSK3BP49841 420 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 CDK5R2Q13319 367 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ZMYND11Q15326 602 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 LRRC23Q53EV4 343 aaPredicted RBP10.76□□□□□ -0.69
USP28-212ENST00000544750 CYBRD1Q53TN4 286 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 OLFML2AQ68BL7 652 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ASPHD2Q6ICH7 369 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ZNF774Q6NX45 483 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ZNF613Q6PF04 617 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 C1orf174Q8IYL3 243 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 SLC26A7Q8TE54 656 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ADAMTS16Q8TE57 1224 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 RASSF5Q8WWW0 418 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 NMD3Q96D46 503 aaKnown RBP10.76□□□□□ -0.69
USP28-212ENST00000544750 CMTM5Q96DZ9 223 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 CCT8L2Q96SF2 557 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 HOPXQ9BPY8 73 aaPredicted RBP10.76□□□□□ -0.69
USP28-212ENST00000544750 ZNF426Q9BUY5 554 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 SIAEQ9HAT2 523 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 ARL8BQ9NVJ2 186 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 IL20RAQ9UHF4 553 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 UGT2A1Q9Y4X1 527 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 CENPBD1B2RD01 187 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 RNF13O43567 381 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 NDUFA7O95182 113 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 OR6A2O95222 327 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 CH25HO95992 272 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 NGFP01138 241 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 CCNOP22674 350 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 ZNF84P51523 738 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 PSME3P61289 254 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 BTG1P62324 171 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 MRPS34P82930 218 aaKnown RBP10.75□□□□□ -0.69
USP28-212ENST00000544750 TNFAIP6P98066 277 aaPredicted RBP10.75□□□□□ -0.69
USP28-212ENST00000544750 HSF2Q03933 536 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 NOXO1Q8NFA2 376 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 SAMD8Q96LT4 415 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 PRSS27Q9BQR3 290 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 BEX1Q9HBH7 125 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 NANSQ9NR45 359 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 C1RLQ9NZP8 487 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 ZNF229Q9UJW7 825 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 LRCH1Q9Y2L9 728 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 AP3M1Q9Y2T2 418 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 SH3GLB1Q9Y371 365 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 PLXNB1O43157 2135 aa10.75□□□□□ -0.69
USP28-212ENST00000544750 IGKV1D-43A0A0B4J1Z2 117 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 C5orf49A4QMS7 147 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 TRAPPC13A5PLN9 417 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 CEACAM18A8MTB9 384 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 M0QZ24 198 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 CXCR6O00574 342 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 TRMUO75648 421 aaKnown RBP10.74□□□□□ -0.69
USP28-212ENST00000544750 WNT2P09544 360 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 OR1E2P47887 323 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 RAG2P55895 527 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 CLRN1P58418 232 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 PPP1CBP62140 327 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 PSG4Q00888 419 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 PSG7Q13046 419 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 DEFB112Q30KQ8 113 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 ESCO2Q56NI9 601 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 ZMAT1Q5H9K5 638 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 MTX3Q5HYI7 312 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 Q6ZR03 302 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 C17orf107Q6ZR85 190 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 VTCN1Q7Z7D3 282 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 OR4F5Q8NH21 305 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 AKR7LQ8NHP1 331 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 ASB10Q8WXI3 467 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 RBM4BQ9BQ04 359 aaKnown RBP10.74□□□□□ -0.69
USP28-212ENST00000544750 EIF3KQ9UBQ5 218 aaKnown RBP10.74□□□□□ -0.69
USP28-212ENST00000544750 OR5V1Q9UGF6 321 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 BAG5Q9UL15 447 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 SLC7A7Q9UM01 511 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 NBEAL2Q6ZNJ1 2754 aa10.74□□□□□ -0.69
USP28-212ENST00000544750 DNAH3Q8TD57 4116 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 IGHV2-70DA0A0C4DH43 119 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 CLPSL1A2RUU4 121 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 TIMM23O14925 209 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 DCTN3O75935 186 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 SLC2A10O95528 541 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 FAM107AO95990 144 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 SELEP16581 610 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 FUT4P22083 530 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 CPT2P23786 658 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 CDAP32320 146 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 MDH2P40926 338 aaKnown RBP10.73□□□□□ -0.69
USP28-212ENST00000544750 GDI2P50395 445 aaKnown RBP10.73□□□□□ -0.69
USP28-212ENST00000544750 UGT2B15P54855 530 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 SELENOWP63302 87 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 FBLN7Q53RD9 439 aa10.73□□□□□ -0.69
USP28-212ENST00000544750 FAM205BPQ63HN1 556 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms