RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CPT2P23786 658 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 GIFP27352 417 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 APEX1P27695 318 aaKnown RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 CDAP32320 146 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 NR4A2P43354 598 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 GPR6P46095 362 aaPredicted RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OMPP47874 163 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 HTR5AP47898 357 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 GYS2P54840 703 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 HGFACQ04756 655 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 FLOT2Q14254 428 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 GGTLC2Q14390 218 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 PHYHD1Q5SRE7 291 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 MBNL2Q5VZF2 373 aaKnown RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OR2T5Q6IEZ7 315 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 LCN8Q6JVE9 175 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 C1orf94Q6P1W5 598 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 LEG1Q6P5S2 330 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 CYP2R1Q6VVX0 501 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 B3GLCTQ6Y288 498 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF525Q8N782 197 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 PROKR2Q8NFJ6 384 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OR2T33Q8NG76 320 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OR1J1Q8NGS3 322 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OR2T29Q8NH02 315 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 TEX47Q8TBZ9 253 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 TMEM158Q8WZ71 300 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 HDAC2Q92769 488 aaKnown RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 RAB1CQ92928 201 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SPTSSAQ969W0 71 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 APOBEC3DQ96AK3 386 aaPredicted RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 CCDC124Q96CT7 223 aaKnown RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 RASD2Q96D21 266 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 RAB39BQ96DA2 213 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 MS4A3Q96HJ5 214 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 PLEKHA8Q96JA3 519 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 C4orf45Q96LM5 186 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 DOK1Q99704 481 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SYT3Q9BQG1 590 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 THTPAQ9BU02 230 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 HCAR1Q9BXC0 346 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 RSPO3Q9BXY4 272 aaPredicted RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 BEX2Q9BXY8 128 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OR2H1Q9GZK4 316 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SLC22A4Q9H015 551 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 RACGAP1Q9H0H5 632 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 HDHD2Q9H0R4 259 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SYT4Q9H2B2 425 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 OR52D1Q9H346 318 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SAP30LQ9HAJ7 183 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 YAE1D1Q9NRH1 226 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 TBC1D23Q9NUY8 699 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 KIF17Q9P2E2 1029 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 GDF2Q9UK05 429 aaPredicted RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 GRIP1Q9Y3R0 1128 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 SAMHD1Q9Y3Z3 626 aaKnown RBP4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 V9GYQ6 96 aa4.83□□□□□ -1.64
CLSTN3-215ENST00000544584 IGLV3-9A0A075B6K5 115 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 TRBV4-1A0A0J9YWV2 114 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 LOC100289279A0A1B0GTE1 492 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 DHRS12A0PJE2 317 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ARRDC5A6NEK1 342 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 LRRC30A6NM36 301 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 C17orf100A8MU93 164 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 B4DSR2 109 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 CLDN25C9JDP6 229 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 H3BN98 237 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 SOCS2O14508 198 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 PPIHO43447 177 aaKnown RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ICMTO60725 284 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 DEAF1O75398 565 aaPredicted RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 CIB2O75838 187 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 FAM157BP0CG42 384 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 FCGR1AP12314 374 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 RAC2P15153 192 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF23P17027 643 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 CFL1P23528 166 aaKnown RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 FMO3P31513 532 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 MAGEA2P43356 314 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 LIMS1P48059 325 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF81P51508 661 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 TPTEP56180 551 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ACTR3P61158 418 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 PPP1CBP62140 327 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 PSG4Q00888 419 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 TAF13Q15543 124 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 KCNMB1Q16558 191 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 MICAQ29983 383 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 MST1LQ2TV78 715 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 TMEM249Q2WGJ8 235 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF620Q6ZNG0 422 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 DNM1P46Q6ZS02 220 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 RASSF6Q6ZTQ3 369 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 FOXL2NBQ6ZUU3 175 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 FAM122BQ7Z309 247 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 IGFN1Q86VF2 1251 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 TSPYL5Q86VY4 417 aaPredicted RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 SPATA24Q86W54 205 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms