RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	GGH	Q92820	318 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	S100PBP	Q96BU1	408 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	INPP5E	Q9NRR6	644 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	MRPS18A	Q9NVS2	196 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	PLEK2	Q9NYT0	353 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	NDRG3	Q9UGV2	375 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	PSORS1C1	Q9UIG5	152 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	GDF2	Q9UK05	429 aa	Predicted RBP	10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	IKZF2	Q9UKS7	526 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	EXOG	Q9Y2C4	368 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	TIMM10B	Q9Y5J6	103 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	SNX5	Q9Y5X3	404 aa		10.41	□□□□□ -0.74
DDB1-223	ENST00000543658	HEATR1	Q9H583	2144 aa	Known RBP	10.4	□□□□□ -0.74
DDB1-223	ENST00000543658		A0A1W2PR80	420 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	ZNF878	C9JN71	531 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SGCE	O43556	437 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	PTH	P01270	115 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	HLA-H	P01893	362 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SCG5	P05408	212 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	ZNF32	P17041	273 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	HSD11B1	P28845	292 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SLC15A1	P46059	708 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	ACTA2	P62736	377 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	RAB1A	P62820	205 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	ACTG2	P63267	376 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	TUBA1B	P68363	451 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	TUBA4A	P68366	448 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SORD	Q00796	357 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	PIGF	Q07326	219 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	PPA1	Q15181	289 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	RAB35	Q15286	201 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	LAIR2	Q6ISS4	152 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	ALKBH2	Q6NS38	261 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	CORO6	Q6QEF8	472 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	TUBA1A	Q71U36	451 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	KRT77	Q7Z794	578 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SSC4D	Q8WTU2	575 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SNX33	Q8WV41	574 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	HSD17B8	Q92506	261 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	SLAMF6	Q96DU3	332 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	NR1H4	Q96RI1	486 aa	Predicted RBP	10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	MED18	Q9BUE0	208 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	TTTY10	Q9BZA0	68 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	HDHD2	Q9H0R4	259 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	FGF20	Q9NP95	211 aa	Predicted RBP	10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	CENPM	Q9NSP4	180 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	CYB5R1	Q9UHQ9	305 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	DIMT1	Q9UNQ2	313 aa	Known RBP	10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	PCDHGB5	Q9Y5G0	923 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	LHFPL6	Q9Y693	200 aa		10.4	□□□□□ -0.74
DDB1-223	ENST00000543658	RER1	O15258	196 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	KRT8	P05787	483 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	CDK1	P06493	297 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	H2BFM	P0C1H6	154 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	APLNR	P35414	380 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	HTR5A	P47898	357 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	KCTD21	Q4G0X4	260 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	ELFN2	Q5R3F8	820 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	TMPRSS11A	Q6ZMR5	421 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	SPATC1	Q76KD6	591 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	MDP1	Q86V88	176 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	KLHL36	Q8N4N3	616 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	SVOP	Q8N4V2	548 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	SMAP2	Q8WU79	429 aa	Predicted RBP	10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	FBXO17	Q96EF6	278 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	BOD1	Q96IK1	185 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	ATF6B	Q99941	703 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	KCNS3	Q9BQ31	491 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	RHNO1	Q9BSD3	238 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	ABHD6	Q9BV23	337 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	ALG8	Q9BVK2	526 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	MRO	Q9BYG7	248 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	OR2H1	Q9GZK4	316 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	NGB	Q9NPG2	151 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658	ERGIC3	Q9Y282	383 aa		10.39	□□□□□ -0.75
DDB1-223	ENST00000543658		A0A1W2PQL4	384 aa	Predicted RBP	10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	HAX1	O00165	279 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	MRPS14	O60783	128 aa	Known RBP	10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	IGHA1	P01876	353 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	TACSTD2	P09758	323 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	PATE4	P0C8F1	98 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	ALOX5AP	P20292	161 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	CCKAR	P32238	428 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	RIDA	P52758	137 aa	Known RBP	10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	HCCS	P53701	268 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	GRB2	P62993	217 aa	Known RBP	10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	SLC35A2	P78381	396 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	EGR3	Q06889	387 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	ECH1	Q13011	328 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	PCK2	Q16822	640 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	TBC1D28	Q2M2D7	210 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	PABPC1L2A	Q5JQF8	200 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	ZNF774	Q6NX45	483 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	CFAP77	Q6ZQR2	320 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	PLEKHG7	Q6ZR37	379 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	LHFPL3	Q86UP9	236 aa		10.38	□□□□□ -0.75
DDB1-223	ENST00000543658	WFDC8	Q8IUA0	241 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms