RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 COMMD4Q9H0A8 199 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 SLITRK2Q9H156 845 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 OR51E2Q9H255 320 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 RNF122Q9H9V4 155 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 KCNJ16Q9NPI9 418 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 TXNL4BQ9NX01 149 aaKnown RBP10.18□□□□□ -0.78
COPS7A-217ENST00000543537 GALNT8Q9NY28 637 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 FREM3P0C091 2139 aa10.18□□□□□ -0.78
COPS7A-217ENST00000543537 HEATR5AQ86XA9 2040 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 IGLV1-36A0A0B4J1U3 117 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TRAV1-2A0A0B4J238 106 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 A0A0G2JNJ9 132 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TRBV2A0A0J9YWF9 115 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TMEM212A6NML5 194 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 GPX5O75715 221 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TRAPPC6AO75865 159 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 AKR7A3O95154 331 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 POU3F2P20265 443 aaPredicted RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 NPR2P20594 1047 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 LAP3P28838 519 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CEACAM8P31997 349 aaPredicted RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF133P52736 654 aaPredicted RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 LSM6P62312 80 aaKnown RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 AQP6Q13520 282 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CDK5R1Q15078 307 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SLC25A35Q3KQZ1 300 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 NRN1LQ496H8 165 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 HBMQ6B0K9 141 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 NHLRC1Q6VVB1 395 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 MEX3BQ6ZN04 569 aaKnown RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SEM1Q6ZVN7 128 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CHMP1BQ7LBR1 199 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TMEM99Q8N816 258 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 FAM83FQ8NEG4 500 aaPredicted RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CCDC54Q8NEL0 328 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 OR6Q1Q8NGQ2 317 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TBC1D15Q8TC07 691 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SLC25A46Q96AG3 418 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF524Q96C55 264 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CEP19Q96LK0 163 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CMTM3Q96MX0 182 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TIMP4Q99727 224 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SLIRPQ9GZT3 109 aaKnown RBP10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SLC6A15Q9H2J7 730 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 SP140LQ9H930 580 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TAS2R16Q9NYV7 291 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 EMC3Q9P0I2 261 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 Q9UFV3 132 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 KCNN3Q9UGI6 736 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF281Q9Y2X9 895 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 TACC2O95359 2948 aa10.17□□□□□ -0.78
COPS7A-217ENST00000543537 CD8B2A6NJW9 211 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 LOC110117498-PIK3R3F6TDL0 507 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF593O00488 134 aaPredicted RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 CASKO14936 926 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 SERPINI2O75830 405 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 GYPBP06028 91 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 CLUP10909 449 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 SFTPDP35247 375 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ETV6P41212 452 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF84P51523 738 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 RIDAP52758 137 aaKnown RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 CAPZA1P52907 286 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 SUCLG1P53597 346 aaKnown RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 BIDP55957 195 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 LSM3P62310 102 aaKnown RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ADAM8P78325 824 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 RNPS1Q15287 305 aaKnown RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 HIST3H3Q16695 136 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 FBXL19-AS1Q494R0 122 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ACSF3Q4G176 576 aaPredicted RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF684Q5T5D7 378 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 METAP1DQ6UB28 335 aaPredicted RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF704Q6ZNC4 412 aaPredicted RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 YIPF7Q8N8F6 280 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 NOXO1Q8NFA2 376 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 OR6N2Q8NGY6 317 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 OR2AJ1Q8NGZ0 328 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ABHD4Q8TB40 342 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 RPS4Y2Q8TD47 263 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 UCN2Q96RP3 112 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 CENPOQ9BU64 300 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 EXO5Q9H790 373 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 GNG8Q9UK08 70 aa10.16□□□□□ -0.78
COPS7A-217ENST00000543537 MCTS1Q9ULC4 181 aaKnown RBP10.16□□□□□ -0.78
COPS7A-217ENST00000543537 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 ISPDA4D126 451 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 NKX2-6A6NCS4 301 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 TRAF3IP2O43734 574 aaPredicted RBP10.15□□□□□ -0.78
COPS7A-217ENST00000543537 SLC43A1O75387 559 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 APOL3O95236 402 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 SYNGR4O95473 234 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 MRPL3P09001 348 aaKnown RBP10.15□□□□□ -0.78
COPS7A-217ENST00000543537 PGA4P0DJD7 388 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 PGA3P0DJD8 388 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 CPN1P15169 458 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 ZNF12P17014 697 aa10.15□□□□□ -0.78
COPS7A-217ENST00000543537 EDNRAP25101 427 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms