RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-215	ENST00000543359	GPR160	Q9UJ42	338 aa		11.16	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	COA3	Q9Y2R0	106 aa	Predicted RBP	11.16	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	OR6C6	A6NF89	314 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	ZSCAN5B	A6NJL1	495 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359		H3BSA7	217 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	SLC16A7	O60669	478 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	KHDRBS3	O75525	346 aa	Known RBP	11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	DCTN3	O75935	186 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	IFNA2	P01563	188 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	IGHV1-46	P01743	117 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	ADH4	P08319	380 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	FPR3	P25089	353 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	GPR6	P46095	362 aa	Predicted RBP	11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	GSS	P48637	474 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	HMGA2	P52926	109 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	PPP1CB	P62140	327 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	LSM6	P62312	80 aa	Known RBP	11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	GLO1	Q04760	184 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	DBP	Q10586	325 aa	Predicted RBP	11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	MOG	Q16653	247 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	SPRN	Q5BIV9	151 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	C1orf94	Q6P1W5	598 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	TMEM154	Q6P9G4	183 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	SMARCD3	Q6STE5	483 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	ADCK1	Q86TW2	530 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	GLB1L2	Q8IW92	636 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	ICA1L	Q8NDH6	482 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	ABHD4	Q8TB40	342 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	TSSK2	Q96PF2	358 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	AURKC	Q9UQB9	309 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	CACNG2	Q9Y698	323 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	WNK2	Q9Y3S1	2297 aa		11.15	□□□□□ -0.62
TNFRSF1A-215	ENST00000543359	IGLV1-36	A0A0B4J1U3	117 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	FAM157A	C9JC47	383 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SOCS2	O14508	198 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ARPC3	O15145	178 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	CDC14B	O60729	498 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	GADD45G	O95257	159 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	PPP1R3D	O95685	299 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	GPANK1	O95872	356 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	FABP3	P05413	133 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	GAA	P10253	952 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ATP6V1B2	P21281	511 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	MAGEA2	P43356	314 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ZNF81	P51508	661 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SMIM11A	P58511	58 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	HIST1H3A	P68431	136 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SPIB	Q01892	262 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SCRN3	Q0VDG4	424 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	PSG7	Q13046	419 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	CCNI	Q14094	377 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	CR1L	Q2VPA4	569 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	CCDC92	Q53HC0	331 aa	Predicted RBP	11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	FAM209A	Q5JX71	171 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	HIST2H3PS2	Q5TEC6	136 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	C16orf89	Q6UX73	402 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	HIST2H3A	Q71DI3	136 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SNX33	Q8WV41	574 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SLC7A6	Q92536	515 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	NDEL1	Q9GZM8	345 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	OR52D1	Q9H346	318 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ELOVL3	Q9HB03	270 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	TBCCD1	Q9NVR7	557 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ASH2L	Q9UBL3	628 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	NDRG4	Q9ULP0	352 aa	Known RBP	11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	B9D1	Q9UPM9	204 aa		11.14	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	TCRBV5S2	A0A599	114 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359		B2RBV5	119 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	PPIH	O43447	177 aa	Known RBP	11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SGCE	O43556	437 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	DOK2	O60496	412 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	T-ENOL	P0DO92	83 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	GCH1	P30793	250 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	RRM2	P31350	389 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	RPS6KA3	P51812	740 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	DVL1P1	P54792	670 aa	Predicted RBP	11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	AQP6	Q13520	282 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	TST	Q16762	297 aa	Known RBP	11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	PGBD2	Q6P3X8	592 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	USP51	Q70EK9	711 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	OR6V1	Q8N148	313 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	OR4C15	Q8NGM1	316 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	FANK1	Q8TC84	345 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	MCUR1	Q96AQ8	359 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	NSL1	Q96IY1	281 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	SAMD8	Q96LT4	415 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ERMAP	Q96PL5	475 aa	Predicted RBP	11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	DDO	Q99489	341 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	NARFL	Q9H6Q4	476 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	NDE1	Q9NXR1	346 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	TREM2	Q9NZC2	230 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	ACTR3B	Q9P1U1	418 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	STARD10	Q9Y365	291 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	LYVE1	Q9Y5Y7	322 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	LHFPL6	Q9Y693	200 aa		11.13	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	TANC2	Q9HCD6	1990 aa		11.12	□□□□□ -0.63
TNFRSF1A-215	ENST00000543359	IGHV1-69-2	A0A0G2JMI3	117 aa		11.12	□□□□□ -0.63

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