RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 CSNK1A1P48729 337 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 ANXA11P50995 505 aaKnown RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 PPP1CBP62140 327 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 HBA1P69905 142 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SLC35A2P78381 396 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 C2orf54Q08AI8 447 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 COX10Q12887 443 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 GNA13Q14344 377 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 HABP2Q14520 560 aaPredicted RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SYPL1Q16563 259 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 MS4A18Q3C1V0 323 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SLC36A2Q495M3 483 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 ZMAT1Q5H9K5 638 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 MTX3Q5HYI7 312 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 CFAP157Q5JU67 520 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 NKAPLQ5M9Q1 402 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 MRPL2Q5T653 305 aaKnown RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 WDR25Q64LD2 544 aaPredicted RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 WBP2NLQ6ICG8 309 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 H1FNTQ75WM6 255 aaPredicted RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 KRT77Q7Z794 578 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 NDUFA11Q86Y39 141 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 PTOV1Q86YD1 416 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 CLECL1Q8IZS7 167 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 KRTCAP2Q8N6L1 136 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 C10orf53Q8N6V4 93 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SCAIQ8N9R8 606 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 BOLLQ8N9W6 283 aaKnown RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SPERTQ8NA61 448 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 ATG16L2Q8NAA4 619 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SDR9C7Q8NEX9 313 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 Q8NFD4 153 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 OR4K5Q8NGD3 323 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 OR4A15Q8NGL6 344 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 OR2T11Q8NH01 316 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 MFSD8Q8NHS3 518 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SFXN5Q8TD22 340 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 NSMAFQ92636 917 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 DPF1Q92782 380 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 TAAR8Q969N4 342 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF566Q969W8 418 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 LRR1Q96L50 414 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 C3orf30Q96M34 536 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 OR2V2Q96R30 315 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SIGLEC11Q96RL6 698 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 DCTN5Q9BTE1 182 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 KCNN2Q9H2S1 579 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 MMADHCQ9H3L0 296 aaPredicted RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 C1orf198Q9H425 327 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 GSTO2Q9H4Y5 243 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 MBNL3Q9NUK0 354 aaKnown RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 ATAD3AQ9NVI7 634 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 KLHL14Q9P2G3 628 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 B3GAT1Q9P2W7 334 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 RPS6KB2Q9UBS0 482 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 SCOCQ9UIL1 159 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 CAB39Q9Y376 341 aaPredicted RBP3.92□□□□□ -1.78
LIMS1-214ENST00000542845 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
LIMS1-214ENST00000542845 LYSTQ99698 3801 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 GOLGA6L6A8MZA4 724 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 FTCDNL1E5RQL4 147 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 SURF4O15260 269 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PEX11AO75192 247 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MFN2O95140 757 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 SNAP29O95721 258 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 AGR2O95994 175 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 OPN1SWP03999 348 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 IFNW1P05000 195 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 CD1AP06126 327 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 CD55P08174 381 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 ADH4P08319 380 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 RAP2AP10114 183 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PRG2P13727 222 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MMP9P14780 707 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MALP21145 153 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 EPHA3P29320 983 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 CHI3L1P36222 383 aaPredicted RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 RPL3P39023 403 aaKnown RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 WNT5AP41221 380 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 KIR2DS4P43632 304 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 GDI2P50395 445 aaKnown RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PRKAA2P54646 552 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 BIDP55957 195 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 DLX1P56177 255 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 HOXC5Q00444 222 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 FUT5Q11128 374 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PSG7Q13046 419 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 DCTN2Q13561 401 aaKnown RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 TAF11Q15544 211 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PABPC1L2AQ5JQF8 200 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 KANK2Q63ZY3 851 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 OR4F3Q6IEY1 312 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 UNQ6126/PRO20091Q6UXV3 157 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 WDR88Q6ZMY6 472 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF627Q7L945 461 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 VMO1Q7Z5L0 202 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MOGAT3Q86VF5 341 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 CALHM3Q86XJ0 350 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 WFDC3Q8IUB2 231 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms