RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 DUX4L6P0CJ89 424 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 DUX4L7P0CJ90 424 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 NPR2P20594 1047 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 IL11P20809 199 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CEACAM8P31997 349 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 BUD31P41223 144 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 GABRA4P48169 554 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 INSM1Q01101 510 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 RAB40BQ12829 278 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CLINT1Q14677 625 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ELOCQ15369 112 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC25A35Q3KQZ1 300 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 FHL5Q5TD97 284 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 FAAP20Q6NZ36 180 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CD200R1LQ6Q8B3 271 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 LDLRAD3Q86YD5 345 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PUSL1Q8N0Z8 303 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CA13Q8N1Q1 262 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR2L13Q8N349 312 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 LRRC25Q8N386 305 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 C19orf47Q8N9M1 422 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR5M9Q8NGP3 310 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR5J2Q8NH18 312 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 THAP6Q8TBB0 222 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PHYHIPQ92561 330 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 RNF2Q99496 336 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 EGLN3Q9H6Z9 239 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 TCF7L1Q9HCS4 588 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 DUX4Q9UBX2 424 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 EXOSC1Q9Y3B2 195 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 NPTNQ9Y639 398 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 A4D1N5 150 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF860A6NHJ4 632 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 LILRA5A6NI73 299 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 HPP00738 406 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 SNRPBP14678 240 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PRKXP51817 358 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CEBPGP53567 150 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 UBE2MP61081 183 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 DMWDQ09019 674 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 GUCA2BQ16661 112 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CCDC157Q569K6 752 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF660Q6AZW8 331 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 SFXN4Q6P4A7 337 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ARL9Q6T311 187 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CSNK1A1LQ8N752 337 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 NUP43Q8NFH3 380 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR52B4Q8NGK2 314 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR4Q3Q8NH05 313 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR14A16Q8NHC5 309 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC7A13Q8TCU3 470 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 LMX1AQ8TE12 382 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 KAT2AQ92830 837 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 RERGQ96A58 199 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF354BQ96LW1 612 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ALKBH3Q96Q83 286 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR7D2Q96RA2 312 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF430Q9H8G1 570 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 STARD5Q9NSY2 213 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 GSKIPQ9P0R6 139 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 WIF1Q9Y5W5 379 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF780BQ9Y6R6 833 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CEP192Q8TEP8 1941 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ARRDC5A6NEK1 342 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PRODHO43272 600 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 TLX3O43711 291 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ICOSLGO75144 302 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PAX1P15863 534 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ACHEP22303 614 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 GDNFP39905 211 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CD200P41217 278 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CDH11P55287 796 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 RAP2BP61225 183 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 RAP1AP62834 184 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF155Q12901 538 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PRTGQ2VWP7 1150 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 DEFB110Q30KQ9 67 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PRAMEF8Q5VWM4 474 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PRAMEF7Q5VXH5 474 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC22A10Q63ZE4 541 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 TCTN3Q6NUS6 607 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ULK3Q6PHR2 472 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CLEC9AQ6UXN8 241 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 LSRQ86X29 649 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 GKN2Q86XP6 184 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR4N5Q8IXE1 308 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OR11G2Q8NGC1 345 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 XAGE5Q8WWM1 108 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 DNASE2BQ8WZ79 361 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 HAS2Q92819 552 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 PIGQQ9BRB3 760 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 ISG20L2Q9H9L3 353 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 CHODLQ9H9P2 273 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 OPN4Q9UHM6 478 aa7.23□□□□□ -1.25
PDLIM5-221ENST00000542407 FAAHO00519 579 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 FGF17O60258 216 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms