RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 LYPD4Q6UWN0 246 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 HIST2H3AQ71DI3 136 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 Q71RC1 249 aaPredicted RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 JAZF1Q86VZ6 243 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 SLC26A10Q8NG04 563 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 OR51L1Q8NGJ5 315 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 PTP4A1Q93096 173 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 DUS3LQ96G46 650 aaKnown RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 COX4I2Q96KJ9 171 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 VRK1Q99986 396 aaPredicted RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 RBM4Q9BWF3 364 aaKnown RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 HCAR1Q9BXC0 346 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 NMNAT2Q9BZQ4 307 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 MMADHCQ9H3L0 296 aaPredicted RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 POFUT1Q9H488 388 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 CDH20Q9HBT6 801 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 MRPL22Q9NWU5 206 aaKnown RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 ASH2LQ9UBL3 628 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 DUSP13Q9UII6 198 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 SPEF1Q9Y4P9 236 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 PMF1-BGLAPU3KQ54 211 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 ACANP16112 2415 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 ARRDC5A6NEK1 342 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 OR6C6A6NF89 314 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 ICMTO60725 284 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 LY6G6DO95868 133 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 RENP00797 406 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 PTHP01270 115 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 GYPBP06028 91 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 DBHP09172 617 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 NAT2P11245 290 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 CRABP1P29762 137 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 MPV17P39210 176 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 RPS27P42677 84 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 RAD52P43351 418 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 EVX1P49640 407 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 PPOXP50336 477 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 GDI2P50395 445 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 DAPP51397 102 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 SNRPD2P62316 118 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 TEKQ02763 1124 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 CRMP1Q14194 572 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 GK3PQ14409 553 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 ALKBH6Q3KRA9 238 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 SPATA46Q5T0L3 261 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 C1orf146Q5VVC0 180 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 TMEM236Q5W0B7 351 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 RPL13AP3Q6NVV1 102 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 SHQ1Q6PI26 577 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 RFPL4BQ6ZWI9 263 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 AMIGO2Q86SJ2 522 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 LINC00346Q8IVM7 164 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 OR52L1Q8NGH7 329 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 OR9Q1Q8NGQ5 310 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 OR1J2Q8NGS2 313 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 LRTOMTQ8WZ04 291 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 GTF3AQ92664 365 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 MARS2Q96GW9 593 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 C4orf45Q96LM5 186 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 BDH2Q9BUT1 245 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 REG4Q9BYZ8 158 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 RACGAP1Q9H0H5 632 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 TPK1Q9H3S4 243 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 C1orf198Q9H425 327 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 HEATR1Q9H583 2144 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 MED20Q9H944 212 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 TBC1D23Q9NUY8 699 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 AP4S1Q9Y587 144 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 FKBP7Q9Y680 259 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 ARID1AO14497 2285 aa8.34□□□□□ -1.07
YBX3-212ENST00000542002 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
YBX3-212ENST00000542002 PLCE1Q9P212 2302 aa8.34□□□□□ -1.08
YBX3-212ENST00000542002 SVEP1Q4LDE5 3571 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 IGLV3-9A0A075B6K5 115 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 TVP23AA6NH52 213 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 FAM183AA6NL82 134 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 VSTM5A8MXK1 200 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 LYNX1G3V0Z9 82 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 SGCEO43556 437 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 MITFO75030 526 aaPredicted RBP8.33□□□□□ -1.08
YBX3-212ENST00000542002 E2F6O75461 281 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 LCKP06239 509 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 LYNX1P0DP58 116 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 BMP4P12644 408 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 OSMP13725 252 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 HOXB6P17509 224 aaKnown RBP8.33□□□□□ -1.08
YBX3-212ENST00000542002 ANOS1P23352 680 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 POU1F1P28069 291 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 NUDT6P53370 316 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 CDK5Q00535 292 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 KRTAP1-1Q07627 177 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 AQP6Q13520 282 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 GINS1Q14691 196 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 ATP6AP1Q15904 470 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 KRTAP27-1Q3LI81 207 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 LINC01590Q5TEZ4 76 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 RGS7BPQ6MZT1 257 aaPredicted RBP8.33□□□□□ -1.08
YBX3-212ENST00000542002 SLC18B1Q6NT16 456 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 FAHD1Q6P587 224 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms