RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 F5H0A9 414 aaPredicted RBP8.23□□□□□ -1.09
THBS3-211ENST00000541990 SGCEO43556 437 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 ICOSLGO75144 302 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 NDUFS6O75380 124 aaKnown RBP8.23□□□□□ -1.09
THBS3-211ENST00000541990 ITGB2P05107 769 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 DBIP07108 87 aaKnown RBP8.23□□□□□ -1.09
THBS3-211ENST00000541990 SLC35G6P0C7Q6 338 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 FOLR1P15328 257 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 ZNF28P17035 718 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 CASRP41180 1078 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 MPPED2Q15777 294 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 SCGB2B2Q4G0G5 96 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 PAN3Q58A45 887 aaKnown RBP8.23□□□□□ -1.09
THBS3-211ENST00000541990 C11orf87Q6NUJ2 197 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 RHOUQ7L0Q8 258 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 GABRG1Q8N1C3 465 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 OR1M1Q8NGA1 313 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 OR4N2Q8NGD1 307 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 OR5M8Q8NGP6 311 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 PPP1R14AQ96A00 147 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 TMEM106AQ96A25 262 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 RERGQ96A58 199 aaPredicted RBP8.23□□□□□ -1.09
THBS3-211ENST00000541990 CCDC74AQ96AQ1 378 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 PDCD10Q9BUL8 212 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 RAB11FIP5Q9BXF6 653 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 ARRDC1-AS1Q9H2J1 176 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 PIGMQ9H3S5 423 aa8.23□□□□□ -1.09
THBS3-211ENST00000541990 LRP4O75096 1905 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 A0A1B0GTI1 187 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 FGF17O60258 216 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 WNT11O96014 354 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 CSF1P09603 554 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 FOSL1P15407 271 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 AVPR2P30518 371 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 GABRA3P34903 492 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 MNDAP41218 407 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 AKR1C3P42330 323 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 CDKN2AP42771 156 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 TGIF1Q15583 401 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 NKPD1Q17RQ9 610 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 MICBQ29980 383 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 C14orf28Q4W4Y0 310 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 DHRS7BQ6IAN0 325 aaPredicted RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 ASPHD2Q6ICH7 369 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 ANKRD16Q6P6B7 361 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 KIRREL2Q6UWL6 708 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 TTLL10Q6ZVT0 673 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 C19orf47Q8N9M1 422 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 CAMKVQ8NCB2 501 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 OR4S1Q8NGB4 309 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 OR5AK2Q8NH90 309 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 FOXN4Q96NZ1 517 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 AMELYQ99218 206 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 C1orf198Q9H425 327 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 AKIRIN1Q9H9L7 192 aaPredicted RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 TMEM27Q9HBJ8 222 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 ZNF629Q9UEG4 869 aaPredicted RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 FARSAQ9Y285 508 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 PLEKHA6Q9Y2H5 1048 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 NOP16Q9Y3C1 178 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 ENTPD2Q9Y5L3 495 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 DOK2O60496 412 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 NDUFB2O95178 105 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 FARS2O95363 451 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 MAOAP21397 527 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 ACAA2P42765 397 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 DCDP81605 110 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 PDZK1IP1Q13113 114 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 RBM39Q14498 530 aaKnown RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 HABP2Q14520 560 aaPredicted RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 SWI5Q1ZZU3 235 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 AKIRIN2Q53H80 203 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.22□□□□□ -1.09
THBS3-211ENST00000541990 OR10K2Q6IF99 312 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 LEG1Q6P5S2 330 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 BHLHE23Q8NDY6 225 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 CYYR1Q96J86 154 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 ALG12Q9BV10 488 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 SLITRK2Q9H156 845 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 C14orf105Q9NVL8 296 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 MBD2Q9UBB5 411 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 PILRBQ9UKJ0 227 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 OTOGLQ3ZCN5 2332 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 SDK2Q58EX2 2172 aa8.22□□□□□ -1.09
THBS3-211ENST00000541990 PRRC2CQ9Y520 2896 aaKnown RBP8.21□□□□□ -1.09
THBS3-211ENST00000541990 FRYQ5TBA9 3013 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 A0A0D9SG52 128 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 A0A1W2PPE3 182 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 ABHD16AO95870 558 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 CD8AP01732 235 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 HLA-AP01891 365 aaKnown RBP8.21□□□□□ -1.09
THBS3-211ENST00000541990 AMY2AP04746 511 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 CD1AP06126 327 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 FABP1P07148 127 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 TDGF1P13385 188 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 CD34P28906 385 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 CAPZBP47756 277 aa8.21□□□□□ -1.09
THBS3-211ENST00000541990 ALKBH1Q13686 389 aaKnown RBP8.21□□□□□ -1.09
THBS3-211ENST00000541990 SLC22A6Q4U2R8 563 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms