RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PAGE3Q5JUK9 113 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 MRPL2Q5T653 305 aaKnown RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 WBP2NLQ6ICG8 309 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 REEP3Q6NUK4 255 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PLXDC2Q6UX71 529 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 SSX8Q7RTT4 187 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 OLIG3Q7RTU3 272 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 NET1Q7Z628 596 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 VRK2Q86Y07 508 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CADM2Q8N3J6 435 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 LSMEM1Q8N8F7 131 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 LINC01560Q8TB33 94 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ROBO4Q8WZ75 1007 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM19Q96HH6 336 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 BTBD10Q9BSF8 475 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 MED18Q9BUE0 208 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CCDC106Q9BWC9 280 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TAPBPLQ9BX59 468 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 POTEKPQ9BYX7 375 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 KLHL4Q9C0H6 718 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 OPN3Q9H1Y3 402 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 OR10A4Q9H209 315 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 C1orf21Q9H246 121 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 HRH4Q9H3N8 390 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM38AQ9H6F2 299 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PPP1R3EQ9H7J1 279 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CTPS2Q9NRF8 586 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 GID8Q9NWU2 228 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 SELENONQ9NZV5 590 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 EMC3Q9P0I2 261 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 VAPAQ9P0L0 249 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM181Q9P2C4 612 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 RPS6KB2Q9UBS0 482 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 OR14J1Q9UGF5 321 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CLEC4AQ9UMR7 237 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ANGPT4Q9Y264 503 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF443Q9Y2A4 671 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TMED7Q9Y3B3 224 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CACNA1CQ13936 2221 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 MED12LQ86YW9 2145 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 DSPPQ9NZW4 1301 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 IGHV4-28A0A0C4DH34 117 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CLDN24A6NM45 220 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF724A8MTY0 619 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 BBIP1A8MTZ0 92 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 A8MVM7 634 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SLC22A2O15244 555 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 GYG2O15488 501 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 HSPA12AO43301 675 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CYTIPO60759 359 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 TNFAIP8O95379 198 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CH25HO95992 272 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 C1QCP02747 245 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 LCATP04180 440 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 GPIP06744 558 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 ANXA7P20073 488 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CCNA2P20248 432 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 DNASE1P24855 282 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SHC1P29353 583 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 AGTR1P30556 359 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 UGT2B10P36537 528 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 NR4A2P43354 598 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 AMTP48728 403 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CBX3Q13185 183 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SNTB1Q13884 538 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SCARB2Q14108 478 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 P2RY6Q15077 328 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 GUSBP1Q15486 140 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CYP51A1Q16850 503 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 COQ5Q5HYK3 327 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 C11orf87Q6NUJ2 197 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 KCTD18Q6PI47 426 aaPredicted RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 C5orf46Q6UWT4 87 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF836Q6ZNA1 936 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 HMGN2P46Q86SG4 172 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 DHDDSQ86SQ9 333 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 TUSC5Q8IXB3 177 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF100Q8IYN0 542 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 MINDY2Q8NBR6 621 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 CSNK2A3Q8NEV1 391 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 STEAP2Q8NFT2 490 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 PIGXQ8TBF5 258 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SLC26A7Q8TE54 656 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 RNF128Q8TEB7 428 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 DNAJA4Q8WW22 397 aaPredicted RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 RASSF5Q8WWW0 418 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 AURKBQ96GD4 344 aaPredicted RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 KLHDC3Q9BQ90 382 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 ECSITQ9BQ95 431 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SRSF8Q9BRL6 282 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 GPATCH1Q9BRR8 931 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SRXN1Q9BYN0 137 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 MRPS26Q9BYN8 205 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 ESRP2Q9H6T0 727 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 C12orf10Q9HB07 376 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 TMEM27Q9HBJ8 222 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 NGBQ9NPG2 151 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SLC52A3Q9NQ40 469 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SLC25A37Q9NYZ2 338 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms