RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 VENTXO95231 258 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 HSPD1P10809 573 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 GATA1P15976 413 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 GSTM3P21266 225 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 DDOSTP39656 456 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 PTGDSP41222 190 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 RANBP1P43487 201 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 OR3A4PP47883 348 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 CX3CR1P49238 355 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 BCAP31P51572 246 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 EIF3EP60228 445 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 TPM4P67936 248 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 DR1Q01658 176 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ZFP36L1Q07352 338 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 STK38Q15208 465 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 MRPL23Q16540 153 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 LRRC36Q1X8D7 754 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 KLHL40Q2TBA0 621 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 SMUG1Q53HV7 270 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 PAN3Q58A45 887 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 OR2B11Q5JQS5 317 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 PPM1LQ5SGD2 360 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 C22orf42Q6IC83 251 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF343Q6P1L6 599 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF589Q86UQ0 364 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 GPR65Q8IYL9 337 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF100Q8IYN0 542 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 SPERTQ8NA61 448 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF564Q8TBZ8 553 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 FAM222BQ8WU58 562 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 NEIL2Q969S2 332 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 NRBF2Q96F24 287 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 CMTM7Q96FZ5 175 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 PRRC1Q96M27 445 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 OR8B4Q96RC9 309 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 KCTD14Q9BQ13 255 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 KLHDC3Q9BQ90 382 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 TEKT3Q9BXF9 490 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 TRIM4Q9C037 500 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 POLR2J2Q9GZM3 115 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ROGDIQ9GZN7 287 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 NSRP1Q9H0G5 558 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 POLR2J3Q9H1A7 115 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 RGCCQ9H4X1 137 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 GNB4Q9HAV0 340 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 PARVGQ9HBI0 331 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ABCD2Q9UBJ2 740 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 PAIP2BQ9ULR5 123 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 SPAG17Q6Q759 2223 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 OTOGLQ3ZCN5 2332 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CNOT1A5YKK6 2376 aaKnown RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SPTBN2O15020 2390 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 KIAA1671Q9BY89 1806 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 IGHV1OR21-1A0A087WYE8 117 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 GFYI3L273 518 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SIRPB1O00241 398 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 NDUFAB1O14561 156 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 AKR7A2O43488 359 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 PI15O43692 258 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 MGRN1O60291 552 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 HUS1O60921 280 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 LYPLA1O75608 230 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 PAHP00439 452 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 RETP07949 1114 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CCNB1P14635 433 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 IGLL1P15814 213 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 PRKACAP17612 351 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 TCN1P20061 433 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 TBPP20226 339 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 MSR1P21757 451 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CMA1P23946 247 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CD1BP29016 333 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 VHLP40337 213 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SLC1A1P43005 524 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 GLP1RP43220 463 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 NAMPTP43490 491 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ARRB1P49407 418 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CSNK1EP49674 416 aaKnown RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 TMED10P49755 219 aaKnown RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 BLVRAP53004 296 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 FBXW4P57775 412 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 DSCR10P59022 87 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CXCL6P80162 114 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 LIPEQ05469 1076 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ECH1Q13011 328 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 BEX5Q5H9J7 111 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 OR2G6Q5TZ20 316 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 REEP3Q6NUK4 255 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SCD5Q86SK9 330 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 ITPRIPQ8IWB1 547 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 TMEM252Q8N6L7 170 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 CCDC71LQ8N9Z2 235 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 BBS1Q8NFJ9 593 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 VN1R2Q8NFZ6 395 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 RHEBL1Q8TAI7 183 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SLC7A13Q8TCU3 470 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 GPX8Q8TED1 209 aa3.22□□□□□ -1.89
SNHG1-217ENST00000541578 SETD7Q8WTS6 366 aaKnown RBP3.22□□□□□ -1.89
SNHG1-217ENST00000541578 OXGR1Q96P68 337 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms