RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 OR6C6A6NF89 314 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 SGCEO43556 437 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 DOK2O60496 412 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 MPZL1O95297 269 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 HEXAP06865 529 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 ERCC1P07992 297 aaPredicted RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 HIST1H3AP68431 136 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 CBX1P83916 185 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 ZNF362Q5T0B9 420 aaPredicted RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 HIST2H3PS2Q5TEC6 136 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 UNQ6126/PRO20091Q6UXV3 157 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 HIST2H3AQ71DI3 136 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 TMEM179BQ7Z7N9 219 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 ZNF101Q8IZC7 436 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 SDR9C7Q8NEX9 313 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 OR2T33Q8NG76 320 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 OR52E2Q8NGJ4 325 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 OR4Q3Q8NH05 313 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 C10orf105Q8TEF2 133 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 FAM168AQ92567 244 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 FOXN4Q96NZ1 517 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 VRK1Q99986 396 aaPredicted RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 NIPSNAP1Q9BPW8 284 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 RHNO1Q9BSD3 238 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 DYNLRB1Q9NP97 96 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 RPRD1BQ9NQG5 326 aaKnown RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 MYEF2Q9P2K5 600 aaKnown RBP11.25□□□□□ -0.61
LTBR-208ENST00000541005 ASH2LQ9UBL3 628 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 REV1Q9UBZ9 1251 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 LHFPL6Q9Y693 200 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 NDUFS8O00217 210 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 LY6HO94772 140 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 SOX14O95416 240 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 SLC25A16P16260 332 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 KLF3P57682 345 aaPredicted RBP11.24□□□□□ -0.61
LTBR-208ENST00000541005 ERVS71-1P61550 626 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 SLC35F1Q5T1Q4 408 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 RFPL4BQ6ZWI9 263 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 SYNPRQ8TBG9 265 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 UTP4Q969X6 686 aaKnown RBP11.24□□□□□ -0.61
LTBR-208ENST00000541005 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 DUS3LQ96G46 650 aaKnown RBP11.24□□□□□ -0.61
LTBR-208ENST00000541005 SMR3AQ99954 134 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 RBM4Q9BWF3 364 aaKnown RBP11.24□□□□□ -0.61
LTBR-208ENST00000541005 TSSK6Q9BXA6 273 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 NMNAT2Q9BZQ4 307 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 MS4A5Q9H3V2 200 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 RERGLQ9H628 205 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 ARMC1Q9NVT9 282 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 PDP1Q9P0J1 537 aaPredicted RBP11.24□□□□□ -0.61
LTBR-208ENST00000541005 EIF3KQ9UBQ5 218 aaKnown RBP11.24□□□□□ -0.61
LTBR-208ENST00000541005 KCNG2Q9UJ96 466 aa11.24□□□□□ -0.61
LTBR-208ENST00000541005 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 GNGT2O14610 69 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SMAD7O15105 426 aaKnown RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 DEAF1O75398 565 aaPredicted RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 E2F6O75461 281 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 LY6G6DO95868 133 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 GPANK1O95872 356 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 IGHV3-13P01766 116 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 TFP02787 698 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 LCKP06239 509 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 ADRA2AP08913 450 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 CCNOP22674 350 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 TUBG1P23258 451 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 GGT2P36268 569 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 HTR5AP47898 357 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 PDLIM4P50479 330 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SLC25A1P53007 311 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SELENOVP59797 346 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 KRTAP1-1Q07627 177 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 MEP1BQ16820 701 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SLC36A3Q495N2 470 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 CCDC92Q53HC0 331 aaPredicted RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 MBNL2Q5VZF2 373 aaKnown RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 SHQ1Q6PI26 577 aaKnown RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 CLEC9AQ6UXN8 241 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 ASRGL1Q7L266 308 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SLC37A3Q8NCC5 494 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 OR1J1Q8NGS3 322 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 OR2T4Q8NH00 348 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 OR1F12Q8NHA8 337 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 TEX47Q8TBZ9 253 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 DNAJC9Q8WXX5 260 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
LTBR-208ENST00000541005 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 HDHD2Q9H0R4 259 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 FN3KQ9H479 309 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SRA1Q9HD15 236 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms