RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 SMPD2O60906 423 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 SERPINI2O75830 405 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 AQP8O94778 261 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 HLA-DQA2P01906 255 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 F13BP05160 661 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 CD46P15529 392 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 ZNF43P17038 809 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 PTNP21246 168 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 DCTDP32321 178 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 PYCR1P32322 319 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 ETV6P41212 452 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 PPP3R1P63098 170 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 DAZAP2Q15038 168 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 POU4F3Q15319 338 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 ZNF181Q2M3W8 571 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 CHRFAM7AQ494W8 412 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 MESTQ5EB52 335 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 ZNF766Q5HY98 468 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 RAET1LQ5VY80 246 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 DMKNQ6E0U4 476 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 OR5M10Q6IEU7 315 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 METAP1DQ6UB28 335 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 PRSS57Q6UWY2 283 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 ESPNLQ6ZVH7 1005 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 SLC35D2Q76EJ3 337 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 IGFN1Q86VF2 1251 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 GLB1L2Q8IW92 636 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 LRRC75A-AS1Q8N1F1 130 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 OR10H5Q8NGA6 315 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 OR6X1Q8NH79 312 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 NEIL3Q8TAT5 605 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 RASD2Q96D21 266 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 SMIM19Q96E16 107 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 PERPQ96FX8 193 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 SLC25A44Q96H78 314 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 C4orf36Q96KX1 117 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 OR5B2Q96R09 309 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 WACQ9BTA9 647 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 CENPOQ9BU64 300 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 CCDC32Q9BV29 185 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 MROQ9BYG7 248 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 C6orf62Q9GZU0 229 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 SRA1Q9HD15 236 aaKnown RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 ZFP64Q9NPA5 681 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 YAE1D1Q9NRH1 226 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 B9D1Q9UPM9 204 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 UGT2A1Q9Y4X1 527 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 WNK1Q9H4A3 2382 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 TRBV2A0A0J9YWF9 115 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ZC3H12DA2A288 527 aaKnown RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 OR6C65A6NJZ3 312 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 AQP7P3A6NL99 342 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 TMEM212A6NML5 194 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 LRRN3E7EW58 273 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 GABRPO00591 440 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 SLC16A7O60669 478 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 CDRT1O95170 752 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 APOL3O95236 402 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 APOC1P02654 83 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 FAM157CP0CG43 387 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ALOX5APP20292 161 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 NR4A1P22736 598 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 TALDO1P37837 337 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ENTPD1P49961 510 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 GDI2P50395 445 aaKnown RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 CCR9P51686 369 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 AGFG1P52594 562 aaKnown RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 CAPZA1P52907 286 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 CLRN1P58418 232 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 RAC3P60763 192 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 RPS3AP61247 264 aaKnown RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 ROM1Q03395 351 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ZNF85Q03923 595 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 BCL2A1Q16548 175 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 RGS21Q2M5E4 152 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 TMEM176BQ3YBM2 270 aaPredicted RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 LINC01590Q5TEZ4 76 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 FCRLBQ6BAA4 426 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 FDX2Q6P4F2 183 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ARL9Q6T311 187 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 TIGD4Q8IY51 512 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 GHDCQ8N2G8 530 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 TMEM99Q8N816 258 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 OR14L1PQ8NHC6 308 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 OTOSQ8NHW6 89 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ABHD4Q8TB40 342 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 FAM57AQ8TBR7 257 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 C15orf40Q8WUR7 153 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ASB10Q8WXI3 467 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 RPL3LQ92901 407 aaKnown RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 PPP1R14BQ96C90 147 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 CMTM3Q96MX0 182 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 WDFY2Q96P53 400 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 SLC30A2Q9BRI3 323 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 ZNF649Q9BS31 505 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 TMED9Q9BVK6 235 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 CDADC1Q9BWV3 514 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 HCAR1Q9BXC0 346 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 OR2B2Q9GZK3 357 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms