RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GEMIN6Q8WXD5 167 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SAMD8Q96LT4 415 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 PPP3R2Q96LZ3 170 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 TRNT1Q96Q11 434 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 PAFAH2Q99487 392 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 NUDT16L1Q9BRJ7 211 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 DUSP26Q9BV47 211 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SLC19A3Q9BZV2 496 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 DPY30Q9C005 99 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 TRIM15Q9C019 465 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SLC38A1Q9H2H9 487 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 OR51B6Q9H340 312 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 DPAGT1Q9H3H5 408 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 TUBB1Q9H4B7 451 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 MTHFD2LQ9H903 347 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 ACOXLQ9NUZ1 547 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 MRPS18AQ9NVS2 196 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 NINJ2Q9NZG7 142 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 VSX1Q9NZR4 365 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 KIF17Q9P2E2 1029 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 MIOXQ9UGB7 285 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 UTP11Q9Y3A2 253 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SAR1BQ9Y6B6 198 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 IQCMA0A1B0GVH7 501 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 PRSS29PA6NIE9 313 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 UNC119BA6NIH7 251 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF726A6NNF4 738 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 G3V2L1 256 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 MS4A18H0YCH9 400 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM178BH3BS89 294 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 IFNL4K9M1U5 179 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RNASET2O00584 256 aaKnown RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SLC16A6O15403 523 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 MGRN1O60291 552 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 FARS2O95363 451 aaKnown RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 FSTL3O95633 263 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 GKN3PP0CG01 181 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 MYL2P10916 166 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RPS2P15880 293 aaKnown RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 IL7RP16871 459 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 GCSHP23434 173 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TNFSF4P23510 183 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 APLNRP35414 380 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TGFBR2P37173 567 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 MPV17P39210 176 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RPS5P46782 204 aaKnown RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 CSNK1A1P48729 337 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TXNL4AP83876 142 aaKnown RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TNFAIP6P98066 277 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 EMX1Q04741 257 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 EGR4Q05215 589 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 C2orf54Q08AI8 447 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 PTGR1Q14914 329 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 GFOD2Q3B7J2 385 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 MS4A18Q3C1V0 323 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SLC36A2Q495M3 483 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 GALNTL6Q49A17 601 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 LIN52Q52LA3 116 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SPRNQ5BIV9 151 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 XKR7Q5GH72 579 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 DEFB121Q5J5C9 76 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 THEM4Q5T1C6 240 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 FAM69AQ5T7M9 428 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 ATG16L1Q676U5 607 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SLC27A4Q6P1M0 643 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 ZYG11AQ6WRX3 759 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 ZCCHC23Q6ZST2 131 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 ZER1Q7Z7L7 766 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 FAM90A1Q86YD7 464 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 PEX5LQ8IYB4 626 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 CNPY4Q8N129 248 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 CLEC4FQ8N1N0 589 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 KRTCAP2Q8N6L1 136 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 VPS37AQ8NEZ2 397 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 OR4A15Q8NGL6 344 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 VANGL1Q8TAA9 524 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 KLF14Q8TD94 323 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 IPCEF1Q8WWN9 437 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TAAR8Q969N4 342 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SLC41A3Q96GZ6 507 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TXNDC15Q96J42 360 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 MAGEB18Q96M61 343 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SIGLEC11Q96RL6 698 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 ARHGDIGQ99819 225 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 SH3GL3Q99963 347 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RHOXF2Q9BQY4 288 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 EMC6Q9BV81 110 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RAB17Q9H0T7 212 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RNF121Q9H920 327 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 AKIP1Q9NQ31 210 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 PNPOQ9NVS9 261 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 RLIMQ9NVW2 624 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 FAM30AQ9NZY2 134 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 EIF3KQ9UBQ5 218 aaKnown RBP3.8□□□□□ -1.8
SNHG1-214ENST00000540865 IL19Q9UHD0 177 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TBK1Q9UHD2 729 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 PPP1R3CQ9UQK1 317 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 USH1CQ9Y6N9 552 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms