RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 IGHV2OR16-5A0A0B4J2B6 119 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 LOC100130705A0A1B0GUX0 176 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 VSTM5A8MXK1 200 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 ATP6V1G2-DDX39BF2Z307 99 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 M0R129 80 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 HS3ST1O14792 307 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 RER1O15258 196 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 ZNF35P13682 527 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 CCNOP22674 350 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 CALCRP30988 508 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 ENTPD1P49961 510 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 HIST1H3AP68431 136 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 GALK2Q01415 458 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 RIPK1Q13546 671 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 TBC1D28Q2M2D7 210 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 TEX30Q5JUR7 227 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 HIST2H3PS2Q5TEC6 136 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 CORO6Q6QEF8 472 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 LYPD4Q6UWN0 246 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 HIST2H3AQ71DI3 136 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 MEPCEQ7L2J0 689 aaKnown RBP13.43□□□□□ -0.26
DDB1-218ENST00000540784 LINC00346Q8IVM7 164 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 UBE2FQ969M7 185 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 ZMYND19Q96E35 227 aaPredicted RBP13.43□□□□□ -0.26
DDB1-218ENST00000540784 VCXQ9H320 206 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 CDH20Q9HBT6 801 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
DDB1-218ENST00000540784 NDRG4Q9ULP0 352 aaKnown RBP13.43□□□□□ -0.26
DDB1-218ENST00000540784 CENPEQ02224 2701 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 E7EQL1 145 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 E9PQ18 207 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 SLC16A6O15403 523 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 SPARCP09486 303 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 COX5BP10606 129 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 CCL2P13500 99 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 SLC2A5P22732 501 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 NR4A1P22736 598 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 CDH11P55287 796 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 HGFACQ04756 655 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 CCDC92Q53HC0 331 aaPredicted RBP13.42□□□□□ -0.26
DDB1-218ENST00000540784 AADACL4Q5VUY2 407 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 NXNL2Q5VZ03 156 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 TMEM154Q6P9G4 183 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 B3GLCTQ6Y288 498 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 VASH1Q7L8A9 365 aaPredicted RBP13.42□□□□□ -0.26
DDB1-218ENST00000540784 BCDIN3DQ7Z5W3 292 aaKnown RBP13.42□□□□□ -0.26
DDB1-218ENST00000540784 ERI1Q8IV48 349 aaKnown RBP13.42□□□□□ -0.26
DDB1-218ENST00000540784 OR1F12Q8NHA8 337 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 FAM81AQ8TBF8 368 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 LURAP1Q96LR2 239 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 INTS14Q96SY0 518 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 PITX2Q99697 317 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 EIF3KQ9UBQ5 218 aaKnown RBP13.42□□□□□ -0.26
DDB1-218ENST00000540784 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
DDB1-218ENST00000540784 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
DDB1-218ENST00000540784 LOC100509620A0A075B734 347 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 C5orf49A4QMS7 147 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 DLGAP1O14490 977 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 DOK2O60496 412 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 RPS27P42677 84 aaKnown RBP13.41□□□□□ -0.26
DDB1-218ENST00000540784 RAD52P43351 418 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 HTR5AP47898 357 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 FABP6P51161 128 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 RAB35Q15286 201 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 PCK2Q16822 640 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 ELFN2Q5R3F8 820 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 LCN1P1Q5VSP4 162 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 TTC23Q5W5X9 447 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 SHFQ7M4L6 423 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 GID4Q8IVV7 300 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 ZNF611Q8N823 705 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 SMAP2Q8WU79 429 aaPredicted RBP13.41□□□□□ -0.26
DDB1-218ENST00000540784 NRGNQ92686 78 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 FBXW5Q969U6 566 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 POM121L2Q96KW2 1035 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 DHRS9Q9BPW9 319 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 LIME1Q9H400 295 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 MARCH7Q9H992 704 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 RRP15Q9Y3B9 282 aaKnown RBP13.41□□□□□ -0.26
DDB1-218ENST00000540784 DCHS2Q6V1P9 2916 aa13.41□□□□□ -0.26
DDB1-218ENST00000540784 SLC22A31A6NKX4 558 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 SYNGR3O43761 229 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 ATP6V1G2O95670 118 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 PCSK6P29122 969 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 APOBEC3AP31941 199 aaPredicted RBP13.4□□□□□ -0.26
DDB1-218ENST00000540784 UCP2P55851 309 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 SNRPGP62308 76 aaKnown RBP13.4□□□□□ -0.26
DDB1-218ENST00000540784 ECH1Q13011 328 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 KRT80Q6KB66 452 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 VHLLQ6RSH7 139 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 ARL9Q6T311 187 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 UNQ6126/PRO20091Q6UXV3 157 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 C20orf204Q6ZNR8 217 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 CFAP77Q6ZQR2 320 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 DCXRQ7Z4W1 244 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 TIGD4Q8IY51 512 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 PAQR4Q8N4S7 273 aaPredicted RBP13.4□□□□□ -0.26
DDB1-218ENST00000540784 NUP37Q8NFH4 326 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms