RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CD34P28906 385 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 FNTBP49356 437 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 OR2F1Q13607 317 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
NPC1-202ENST00000540608 ETFDHQ16134 617 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 ATRAIDQ6UW56 229 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 TMEM151BQ8IW70 566 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 PRR22Q8IZ63 422 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 ESX1Q8N693 406 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 OR13C8Q8NGS7 320 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 PTX4Q96A99 478 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 GAL3ST1Q99999 423 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 B3GNT4Q9C0J1 378 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 OR8D2Q9GZM6 311 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 TMEM185BQ9H7F4 350 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 BARX1Q9HBU1 254 aaPredicted RBP11.04□□□□□ -0.64
NPC1-202ENST00000540608 LANCL2Q9NS86 450 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 TNFSF18Q9UNG2 199 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 LRP12Q9Y561 859 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 TMEM131Q92545 1883 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 KANTRA0A1W2PQU2 76 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 TMEM200CA6NKL6 621 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
NPC1-202ENST00000540608 CTLA4P16410 223 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 CD96P40200 585 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 C11orf87Q6NUJ2 197 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 MDGA2Q7Z553 956 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 MARCH3Q86UD3 253 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 FBXW5Q969U6 566 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 SLC6A7Q99884 636 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 FBXO4Q9UKT5 387 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 MMP17Q9ULZ9 603 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 CYP8B1Q9UNU6 501 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 GON4LQ3T8J9 2241 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 DCDC2BA2VCK2 349 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 NUDT21O43809 227 aaKnown RBP11.03□□□□□ -0.64
NPC1-202ENST00000540608 SRSF10O75494 262 aaKnown RBP11.03□□□□□ -0.64
NPC1-202ENST00000540608 GP1BBP13224 206 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 IL32P24001 234 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 STARP49675 285 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 HYAL4Q2M3T9 481 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 C1orf100Q5SVJ3 147 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 OR51A2Q8NGJ7 313 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 OR52N5Q8NH56 324 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 ZBTB8AQ96BR9 441 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 WDR13Q9H1Z4 485 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 ZMAT3Q9HA38 289 aaKnown RBP11.03□□□□□ -0.64
NPC1-202ENST00000540608 COMMD9Q9P000 198 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 KLK13Q9UKR3 277 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 HHLA2Q9UM44 414 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 FARSAQ9Y285 508 aaKnown RBP11.03□□□□□ -0.64
NPC1-202ENST00000540608 R4GMQ9 66 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 LOC390937A0A1W2PQ73 354 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 DISC1C4P0D8 188 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 BCL2L11O43521 198 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 WISP1O95388 367 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 IGKV3-11P04433 115 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 ISG15P05161 165 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 ZNF28P17035 718 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 HLA-GP17693 338 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 PGCP20142 388 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 MEF2DQ14814 521 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 ZMYND11Q15326 602 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 TAF13Q15543 124 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 MOGAT2Q3SYC2 334 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 KIAA0895LQ68EN5 471 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 LRFN4Q6PJG9 635 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 OR13C3Q8NGS6 347 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 ZNF721Q8TF20 911 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 VRK1Q99986 396 aaPredicted RBP11.03□□□□□ -0.64
NPC1-202ENST00000540608 IFT46Q9NQC8 304 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 SLC2A8Q9NY64 477 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 HRH3Q9Y5N1 445 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 CACNA1IQ9P0X4 2223 aa11.03□□□□□ -0.64
NPC1-202ENST00000540608 A0A1W2PQD3 144 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 OR14I1A6ND48 311 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 SHISA7A6NL88 538 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 C17orf51A8MQB3 221 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 DNASE2O00115 360 aaPredicted RBP11.02□□□□□ -0.64
NPC1-202ENST00000540608 NPIPB7O75200 414 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 NUDT14O95848 222 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 IGHMP01871 453 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 CNR1P21554 472 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 IL12BP29460 328 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 CAPZBP47756 277 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 FAM74A1Q5RGS3 127 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.02□□□□□ -0.64
NPC1-202ENST00000540608 PAPD4Q6PIY7 484 aaKnown RBP11.02□□□□□ -0.64
NPC1-202ENST00000540608 ACOT7LQ6ZUV0 252 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 SLC25A42Q86VD7 318 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 TMEM17Q86X19 198 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 ZNF584Q8IVC4 421 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 JAGN1Q8N5M9 183 aa11.02□□□□□ -0.64
NPC1-202ENST00000540608 AQP3Q92482 292 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms