RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ZNF607Q96SK3 696 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 HCAR1Q9BXC0 346 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 UPB1Q9UBR1 384 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 H7BY64 318 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 LRP3O75074 770 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 PRNPP04156 253 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 SPARCP09486 303 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF763Q0D2J5 394 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 UBE2V2Q15819 145 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 CDKN3Q16667 212 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF585AQ6P3V2 769 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 GKN2Q86XP6 184 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 HSD17B11Q8NBQ5 300 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 OR2L8Q8NGY9 312 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF775Q96BV0 537 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 TTTY10Q9BZA0 68 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 SGK2Q9HBY8 427 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 NOX4Q9NPH5 578 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 OR2S2Q9NQN1 319 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 INPP5EQ9NRR6 644 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 IL17CQ9P0M4 197 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 PPIL1Q9Y3C6 166 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 CSAG2Q9Y5P2 127 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 DUXAA6NLW8 204 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 TMEM210A6NLX4 147 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 PIN1P1O15428 100 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 HSPA12AO43301 675 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 EPPINO95925 133 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 NTSR1P30989 418 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 GPR4P46093 362 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 POLR2LP62875 67 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 PDE7AQ13946 482 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 NR0B2Q15466 257 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ARSJQ5FYB0 599 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 PARS2Q7L3T8 475 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 OR2T33Q8NG76 320 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ARRDC3Q96B67 414 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 ZBTB8AQ96BR9 441 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 MRGPRX4Q96LA9 322 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 BRF2Q9HAW0 419 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 B4GALT6Q9UBX8 382 aa8.57□□□□□ -1.04
CTNNA1-243ENST00000540387 MUC3AQ02505 3323 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 UMAD1C9J7I0 102 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 KLF8O95600 359 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 HLA-AP01891 365 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 MELTFP08582 738 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC16A1P53985 500 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 PFN3P60673 137 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 MLF2Q15773 248 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 OR2T2Q6IF00 324 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 STEAP1BQ6NZ63 245 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 OLIG3Q7RTU3 272 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 UBE3DQ7Z6J8 389 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 BIVMQ86UB2 503 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 MMP21Q8N119 569 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 TERB2Q8NHR7 220 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC25A43Q8WUT9 341 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SKA2Q8WVK7 121 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 C22orf15Q8WYQ4 148 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 MUCL1Q96DR8 90 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SAMD8Q96LT4 415 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 LYSMD1Q96S90 227 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 STEAP1Q9UHE8 339 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 KCNG2Q9UJ96 466 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SLCO1B1Q9Y6L6 691 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 TCF20Q9UGU0 1960 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 A0A087WZY1 265 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 C19orf67A6NJJ6 358 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 EEF1E1-BLOC1S5C9J1V9 151 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 DVL1O14640 695 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 OGG1O15527 345 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 RRP8O43159 456 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 CA11O75493 328 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 RPLP1P05386 114 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 CALCBP10092 127 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 CLUP10909 449 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 LIPCP11150 499 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 HLA-GP17693 338 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 RAB6AP20340 208 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 PSMB6P28072 239 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC6A9P48067 706 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 RPS13P62277 151 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SYPL1Q16563 259 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 TP53I3Q53FA7 332 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 PIP5KL1Q5T9C9 394 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 CFAP161Q6P656 301 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF620Q6ZNG0 422 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 TMPPEQ6ZT21 453 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 RFLNAQ6ZTI6 216 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 ZSCAN4Q8NAM6 433 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SEMA6DQ8NFY4 1073 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 HPSE2Q8WWQ2 592 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 RELTQ969Z4 430 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SMIM19Q96E16 107 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 NEURL3Q96EH8 262 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 DTD2Q96FN9 168 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 OR2M4Q96R27 311 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms