RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LOC100289279A0A1B0GTE1 492 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 NPIPA5E9PKD4 350 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 PLPP3O14495 311 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 TSPAN2O60636 221 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 CD2P06729 351 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 AKAIN1P0CW23 69 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 SFTPDP35247 375 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 FAUP35544 74 aaKnown RBP12.24□□□□□ -0.45
BNIP3-202ENST00000540159 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 SGCBQ16585 318 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 NPRL2Q8WTW4 380 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 NPIPA1Q9UND3 350 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 PLEKHA6Q9Y2H5 1048 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 POLR1DQ9Y2S0 133 aa12.24□□□□□ -0.45
BNIP3-202ENST00000540159 ALG1L2C9J202 215 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 F5H5P2 479 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TXNDC12O95881 172 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 SEC61A1P61619 476 aaKnown RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TLE3Q04726 772 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 HLXQ14774 488 aaPredicted RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 CDNFQ49AH0 187 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 ELFN2Q5R3F8 820 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 ZNF248Q8NDW4 579 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 SLC26A10Q8NG04 563 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 ZNF578Q96N58 590 aaPredicted RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TTYH1Q9H313 450 aaPredicted RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TXNIPQ9H3M7 391 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 AKIRIN1Q9H9L7 192 aaPredicted RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 PRR13Q9NZ81 148 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 ETV7Q9Y603 341 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 NPTNQ9Y639 398 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 IGKV3D-11A0A0A0MRZ8 115 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 SLC17A2O00624 439 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 LPLP06858 475 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 POLR2HP52434 150 aaKnown RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 PRSS12P56730 875 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TSSK4Q6SA08 328 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 RNF128Q8TEB7 428 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 PDCD10Q9BUL8 212 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 TRAF4Q9BUZ4 470 aaPredicted RBP12.23□□□□□ -0.45
BNIP3-202ENST00000540159 KLRF1Q9NZS2 232 aa12.23□□□□□ -0.45
BNIP3-202ENST00000540159 A8MVM7 634 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SULT1B1O43704 296 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 GIPP09681 153 aaPredicted RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 ATF4P18848 351 aaPredicted RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CSRP1P21291 193 aaKnown RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 VAMP1P23763 118 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CD27P26842 260 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 BIDP55957 195 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 C3orf33Q6P1S2 294 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 KCTD18Q6PI47 426 aaPredicted RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SLC36A1Q7Z2H8 476 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 OR52N4Q8NGI2 321 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 OR5D18Q8NGL1 313 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 OR1N1Q8NGS0 311 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 OR52N5Q8NH56 324 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 ZNF519Q8TB69 540 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 STT3BQ8TCJ2 826 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 RBPMSQ93062 196 aaKnown RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SEH1LQ96EE3 360 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 NOP16Q9Y3C1 178 aaKnown RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 EML6Q6ZMW3 1958 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 A0A1W2PR77 199 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 MASP2O00187 686 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CD1AP06126 327 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 RRASP10301 218 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 S100A11P31949 105 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 DLX5P56178 289 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 RAP2BP61225 183 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 FOXF1Q12946 379 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 MFAP5Q13361 173 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 TAF13Q15543 124 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 PRAMEF20Q5VT98 475 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 GLRX5Q86SX6 157 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 EXOSC3Q9NQT5 275 aaKnown RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SDHAF2Q9NX18 166 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 OR52A1Q9UKL2 312 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 RPH3AQ9Y2J0 694 aaPredicted RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 A0A1W2PP11 408 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 TMEM82A0PJX8 343 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 OR2M5A3KFT3 312 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 LILRA5A6NI73 299 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 METTL12A8MUP2 240 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 LMO7DNF2Z398 122 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 G3V3Y1 287 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CYB5AP00167 134 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 RLN2P04090 185 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CSF1P09603 554 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 PPP3CBP16298 524 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 GNB3P16520 340 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SLC6A8P48029 635 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms