RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TAF15Q92804 592 aaKnown RBP eCLIP12.8□□□□□ -0.36
USB1-203ENST00000539737 NMD3Q96D46 503 aaKnown RBP12.8□□□□□ -0.36
USB1-203ENST00000539737 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 DGCR6LQ9BY27 220 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 CDH10Q9Y6N8 788 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 PRKDCP78527 4128 aaKnown RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 NCR1O76036 304 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 SLC2A10O95528 541 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 TXNDC12O95881 172 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 HLA-HP01893 362 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 OR8G3PP0DMU2 310 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 ADRA2CP18825 462 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 RBMXP38159 391 aaKnown RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 RPS23P62266 143 aaKnown RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 MYBPC1Q00872 1141 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 RFX4Q33E94 735 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 MESTQ5EB52 335 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 PEG10Q86TG7 708 aaKnown RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 SLC22A24Q8N4F4 322 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 CLDN22Q8N7P3 220 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 NEU4Q8WWR8 484 aaPredicted RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 HPS1Q92902 700 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 GCDHQ92947 438 aaPredicted RBP12.79□□□□□ -0.36
USB1-203ENST00000539737 Q96M85 177 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 DNAJB9Q9UBS3 223 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 IL20RAQ9UHF4 553 aa12.79□□□□□ -0.36
USB1-203ENST00000539737 PRSS37A4D1T9 235 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 IMPA2O14732 288 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 ARPC3O15145 178 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 PPP1R3DO95685 299 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 PTDSS1P48651 473 aaKnown RBP12.78□□□□□ -0.36
USB1-203ENST00000539737 ERFP50548 548 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 RAB1AP62820 205 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 MRPS34P82930 218 aaKnown RBP12.78□□□□□ -0.36
USB1-203ENST00000539737 FMODQ06828 376 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 PIGFQ07326 219 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 PPP1R8Q12972 351 aaKnown RBP12.78□□□□□ -0.36
USB1-203ENST00000539737 AVPI1Q5T686 147 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
USB1-203ENST00000539737 SLC25A47Q6Q0C1 308 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 RASSF6Q6ZTQ3 369 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 JAZF1Q86VZ6 243 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 C22orf15Q8WYQ4 148 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 TMEM186Q96B77 213 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 SLCO4A1Q96BD0 722 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 RASD2Q96D21 266 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 IFT27Q9BW83 186 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 ESM1Q9NQ30 184 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 IER3IP1Q9Y5U9 82 aa12.78□□□□□ -0.36
USB1-203ENST00000539737 H7C1C5 153 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 IDH3BO43837 385 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 PTHP01270 115 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 GASTP01350 101 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 NAT2P11245 290 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 FCGR1AP12314 374 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 NOS3P29474 1203 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 GUCA1AP43080 201 aaPredicted RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 ARHGDIAP52565 204 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 SELENOVP59797 346 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 LCN6P62502 163 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 SLC36A2Q495M3 483 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 NSMAFQ92636 917 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 GTF3AQ92664 365 aaKnown RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 DUS3LQ96G46 650 aaKnown RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 SAMD8Q96LT4 415 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 ERMAPQ96PL5 475 aaPredicted RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 SLC6A7Q99884 636 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 KCNN2Q9H2S1 579 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 RNF121Q9H920 327 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 SIAEQ9HAT2 523 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 ZNF275Q9NSD4 429 aaPredicted RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 TBC1D23Q9NUY8 699 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 ARMC1Q9NVT9 282 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.77□□□□□ -0.37
USB1-203ENST00000539737 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
USB1-203ENST00000539737 SLC22A23A1A5C7 686 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 B4DSR2 109 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 SOCS2O14508 198 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 CDC14BO60729 498 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 TIPRLO75663 272 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 MSMBP08118 114 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 PATE4P0C8F1 98 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 EPHA1P21709 976 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 NR4A1P22736 598 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 GPR6P46095 362 aaPredicted RBP12.76□□□□□ -0.37
USB1-203ENST00000539737 GIPRP48546 466 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 PLP2Q04941 152 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 COX10Q12887 443 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
USB1-203ENST00000539737 DNM1P34Q6PK57 102 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 CD300LDQ6UXZ3 194 aa12.76□□□□□ -0.37
USB1-203ENST00000539737 FOXL2NBQ6ZUU3 175 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms