RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ALX4Q9H161 411 aaPredicted RBP18.24■□□□□ 0.51
TMEM260-203ENST00000539559 NXF5Q9H1B4 397 aaKnown RBP18.24■□□□□ 0.51
TMEM260-203ENST00000539559 A0A1B0GTI1 187 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 EEF1E1-BLOC1S5C9J1V9 151 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 BCL2L11O43521 198 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 OR6A2O95222 327 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 TXNDC12O95881 172 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 APEHP13798 732 aaKnown RBP18.24■□□□□ 0.51
TMEM260-203ENST00000539559 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 CDNFQ49AH0 187 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 PRAMEF17Q5VTA0 474 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 CBLN2Q8IUK8 224 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM229BQ8NBD8 167 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 TWSG1Q9GZX9 223 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 SLC6A15Q9H2J7 730 aa18.24■□□□□ 0.51
TMEM260-203ENST00000539559 F5H0A9 414 aaPredicted RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 ARID1AO14497 2285 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF264O43296 627 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 NUDT14O95848 222 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 CLPSP04118 112 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 AGTR1P30556 359 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 ADAM8P78325 824 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 SRSF3P84103 164 aaKnown RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 FNDC7Q5VTL7 733 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 ARHGEF39Q8N4T4 335 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 MMABQ96EY8 250 aaPredicted RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM14AQ9Y6G1 99 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 A0A1W2PPC1 479 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 WIPF3A6NGB9 483 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 C2CD4DB7Z1M9 353 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 DISC1C4P0D8 188 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 SCDO00767 359 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 XKRYO14609 159 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 UTS2O95399 124 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 CD8AP01732 235 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 CTLA4P16410 223 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 SCAND1P57086 179 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 CXADRP78310 365 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 SNTB1Q13884 538 aaKnown RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 OOSP2Q86WS3 158 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM17Q86X19 198 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 PUSL1Q8N0Z8 303 aaKnown RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 OR13H1Q8NG92 308 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 METTL21AQ8WXB1 218 aa18.23■□□□□ 0.51
TMEM260-203ENST00000539559 TSNAXQ99598 290 aaKnown RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 PNO1Q9NRX1 252 aaKnown RBP18.23■□□□□ 0.51
TMEM260-203ENST00000539559 ADCYAP1P18509 176 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 PPM1FP49593 454 aaPredicted RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 PABPC1L2AQ5JQF8 200 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF679Q8IYX0 411 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 MRGPRFQ96AM1 343 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM231Q9H6L2 316 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 UBQLN4Q9NRR5 601 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 FBXO9Q9UK97 447 aaPredicted RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 EMC9Q9Y3B6 208 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 HCRTR2O43614 444 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 VAMP1P23763 118 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 INSM1Q01101 510 aaPredicted RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 BIKQ13323 160 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 EIF2B1Q14232 305 aaKnown RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 ACKR1Q16570 336 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 MANEAQ5SRI9 462 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 CLVS2Q5SYC1 327 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 PAPD4Q6PIY7 484 aaKnown RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 ADAD2Q8NCV1 583 aaKnown RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 OR4D6Q8NGJ1 314 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 GAL3ST4Q96RP7 486 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 SLC25A21Q9BQT8 299 aaPredicted RBP18.22■□□□□ 0.51
TMEM260-203ENST00000539559 FAM117AQ9C073 453 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 MBD2Q9UBB5 411 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 PRELID3BQ9Y3B1 194 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 LRP12Q9Y561 859 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 BRWD1Q9NSI6 2320 aa18.22■□□□□ 0.51
TMEM260-203ENST00000539559 C17orf105B2RV13 164 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 FADS1O60427 444 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 HOXC4P09017 264 aaPredicted RBP18.21■□□□□ 0.51
TMEM260-203ENST00000539559 HNRNPA2B1P22626 353 aaKnown RBP18.21■□□□□ 0.51
TMEM260-203ENST00000539559 CASRP41180 1078 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 FUT7Q11130 342 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 SERTAD2Q14140 314 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.21■□□□□ 0.51
TMEM260-203ENST00000539559 TMPPEQ6ZT21 453 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 SLC22A18ASQ8N1D0 253 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 RNF128Q8TEB7 428 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 NUDCD2Q8WVJ2 157 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 OR8D2Q9GZM6 311 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 ZNF768Q9H5H4 540 aaKnown RBP18.21■□□□□ 0.51
TMEM260-203ENST00000539559 PRMT8Q9NR22 394 aaPredicted RBP18.21■□□□□ 0.51
TMEM260-203ENST00000539559 CPED1A4D0V7 1026 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 SOX1O00570 391 aaPredicted RBP18.21■□□□□ 0.51
TMEM260-203ENST00000539559 TPPPO94811 219 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 AKR1C4P17516 323 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 TMEM92Q6UXU6 159 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 TAF8Q7Z7C8 310 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 LDLRAD3Q86YD5 345 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 PAQR8Q8TEZ7 354 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 LIPHQ8WWY8 451 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 ABHD6Q9BV23 337 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 SEMA6CQ9H3T2 930 aa18.21■□□□□ 0.51
TMEM260-203ENST00000539559 PURGQ9UJV8 347 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms