RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FNTBP49356 437 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CAPZA1P52907 286 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 EIF2B1Q14232 305 aaKnown RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 TAF13Q15543 124 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PHF19Q5T6S3 580 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 OTPQ5XKR4 325 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 OR2W3Q7Z3T1 314 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 LYG2Q86SG7 212 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PARGQ86W56 976 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 LYPD6Q86Y78 171 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CCDC36Q8IYA8 594 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CLRN3Q8NCR9 226 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 FOXN4Q96NZ1 517 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ADOQ96SZ5 270 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CMKLR1Q99788 373 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 NKX3-1Q99801 234 aaPredicted RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 PRRT1Q99946 306 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PTDSS2Q9BVG9 487 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ZNF416Q9BWM5 594 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 RTN4RQ9BZR6 473 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 KLK13Q9UKR3 277 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 HHLA2Q9UM44 414 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 NOP16Q9Y3C1 178 aaKnown RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 TMEM184BQ9Y519 407 aaPredicted RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 LRP12Q9Y561 859 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 DCDC2BA2VCK2 349 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PRAMEF26H0Y7S4 382 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 HCRTR2O43614 444 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ICOSLGO75144 302 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PLGP00747 810 aaPredicted RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 IGHMP01871 453 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ISG15P05161 165 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CTSEP14091 401 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CTHP32929 405 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 GABRA4P48169 554 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 DNASE1L1P49184 302 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 LUMP51884 338 aaPredicted RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 ADAM8P78325 824 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ELOCQ15369 112 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 TOMM34Q15785 309 aaPredicted RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 MOGAT2Q3SYC2 334 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PAN3Q58A45 887 aaKnown RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 PABPC1L2AQ5JQF8 200 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PDSS1Q5T2R2 415 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 UQCC3Q6UW78 93 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 TMEM92Q6UXU6 159 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 C17orf107Q6ZR85 190 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ZNF584Q8IVC4 421 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 TMEM151BQ8IW70 566 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 FRMD1Q8N878 549 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 AQP3Q92482 292 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ADIPOR1Q96A54 375 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 SLC25A36Q96CQ1 311 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 FOXRED1Q96CU9 486 aaPredicted RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 MAP3K3Q99759 626 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PDCD10Q9BUL8 212 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 NUDT9Q9BW91 350 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PIGMQ9H3S5 423 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CERS4Q9HA82 394 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 PNO1Q9NRX1 252 aaKnown RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 LANCL2Q9NS86 450 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 VSIG4Q9Y279 399 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 FARSAQ9Y285 508 aaKnown RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 R4GMQ9 66 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 C5orf42Q9H799 3197 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 ALPK2Q86TB3 2170 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 SPTY2D1-AS1A0A0U1RR47 76 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 A0A1W2PQD3 144 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 METTL21EPA6NDL7 271 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 H0YIG0 161 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 NPIPB7O75200 414 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 HLA-AP01891 365 aaKnown RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 GP1BBP13224 206 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 CTLA4P16410 223 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 PGCP20142 388 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 CD1CP29017 333 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 ARRB1P49407 418 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 PPIAP62937 165 aaKnown RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 CXADRP78310 365 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 MRPS21P82921 87 aaKnown RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 DEFA5Q01523 94 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 MC2RQ01718 297 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 C1orf61Q13536 156 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 FZD2Q14332 565 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 SCGB2B2Q4G0G5 96 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 ELP2Q6IA86 826 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 RAB12Q6IQ22 244 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 FAHD2BQ6P2I3 314 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 PAPD4Q6PIY7 484 aaKnown RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 CORO6Q6QEF8 472 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 MDGA2Q7Z553 956 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 METTL27Q8N6F8 245 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 ZDHHC22Q8N966 263 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 TMEM185AQ8NFB2 350 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 OR51A2Q8NGJ7 313 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 OR13C3Q8NGS6 347 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms