RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 INTS12Q96CB8 462 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 OR2A5Q96R48 311 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 MICU1Q9BPX6 476 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 SYT4Q9H2B2 425 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 KIR3DX1Q9H7L2 352 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 CKLFQ9UBR5 152 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 GHRLQ9UBU3 117 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 TRIOO75962 3097 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 TMEM235A6NFC5 223 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 PRR19A6NJB7 356 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 STK17BO94768 372 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 CEBPBP17676 345 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 F2RL1P55085 397 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 FABP9Q0Z7S8 132 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 ELAVL1Q15717 326 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNF141Q15928 474 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 EDARADDQ8WWZ3 215 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 INTS14Q96SY0 518 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 PHPT1Q9NRX4 125 aaPredicted RBP16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 ASH2LQ9UBL3 628 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 SPACA6W5XKT8 324 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 C13orf42A0A1B0GVH6 325 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 TXNDC12O95881 172 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 ADH1AP07327 375 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 ERCC1P07992 297 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 RCC1P18754 421 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 SERPINF1P36955 418 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 OR10K2Q6IF99 312 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 FBXO46Q6PJ61 603 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 OR4N2Q8NGD1 307 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 CLCC1Q96S66 551 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 DHDHQ9UQ10 334 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 IGKV1D-42A0A075B6H8 117 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 H7C1C5 153 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 EFSO43281 561 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 HTR3BO95264 441 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 MT-ND4LP03901 98 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 CD5P06127 495 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 FOSL1P15407 271 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 LCN6P62502 163 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 MOGAT2Q3SYC2 334 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 TMEFF1Q8IYR6 380 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 LCN9Q8WX39 176 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 AMELYQ99218 206 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 RPH3AQ9Y2J0 694 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 MRPS18BQ9Y676 258 aaKnown RBP16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 HEATR5AQ86XA9 2040 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 DOCK9Q9BZ29 2069 aa16.74■□□□□ 0.27
SFSWAP-207ENST00000538548 MPDZO75970 2070 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 MFNGO00587 321 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 LDLRAD4O15165 306 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 RHOP08100 348 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNHIT3Q15649 155 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNF585AQ6P3V2 769 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 LRRC69Q6ZNQ3 347 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 SLC29A4Q7RTT9 530 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 SHISA5Q8N114 240 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 BADQ92934 168 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 LMF2Q9BU23 707 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 ELOVL3Q9HB03 270 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 PRMT8Q9NR22 394 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 GRHPRQ9UBQ7 328 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 INSL6Q9Y581 213 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 FITM1A5D6W6 292 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 NUDT21O43809 227 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 ADH1CP00326 375 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 CD2P06729 351 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 CD37P11049 281 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 CPT2P23786 658 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNF74Q16587 644 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 TMEM244Q5VVB8 128 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 RNF44Q7L0R7 432 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 C10orf53Q8N6V4 93 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 OTOSQ8NHW6 89 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 LIPHQ8WWY8 451 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 AQP3Q92482 292 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 NAA11Q9BSU3 229 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 LAT2Q9GZY6 243 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 MRPS33Q9Y291 106 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 COLEC10Q9Y6Z7 277 aa16.73■□□□□ 0.27
SFSWAP-207ENST00000538548 NPIPB9F8W1W9 429 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 WRBO00258 174 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 CYR61O00622 381 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 AKR1C4P17516 323 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 GPR18Q14330 331 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 MESTQ5EB52 335 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 FAM76BQ5HYJ3 339 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 EMC4Q5J8M3 183 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 EEF1A1P5Q5VTE0 462 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 ADAD2Q8NCV1 583 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 RNF128Q8TEB7 428 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 PTX4Q96A99 478 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 OR8B4Q96RC9 309 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 CMKLR1Q99788 373 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 NUDT9Q9BW91 350 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 CGGBP1Q9UFW8 167 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 KCNG2Q9UJ96 466 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 SLC22A13Q9Y226 551 aa16.72■□□□□ 0.27
SFSWAP-207ENST00000538548 MUC22E2RYF6 1773 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms